Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02519 atggaaaaagaacaaatgcGGAAGCGGCCTCGTCTAGCATGGGACGTACCCCCGGAGCCAGAGGCGCAGAGGGCTCTGGAGTTGGGTGGTGAAGGATTGAGAAAAAGGCGTGCATCGCCTCCGAAAAGGGATGACGATCGTGATGGGCATTATGTATTTAATCTAGGCGAAAATCTCACTCCAAGATATAAAATACTCAGCAAGATGGGTGAAGGCACATTTGGTCGAGTTTTGGAATGTTGGGATCGTCAAACCAGAGAATACGTGGCTGTTAAGGTAGTCagaagcataaaaaaataccGTGATGCAGCGATGATTGAAGTAGATGTGCTTCAACGTCTAACTAAGAATGATAGAGGCAACTCatgCTGTGTGCAGTTCCGGGACTGGTTTGATTATCGGAATCACATATGTATTGTATTTGAGAAGCTTGGACCAAgcttatttgattttctaaagagaaataaatactaCCCATTCCCTGTGGATCTTGTTCGGGAATTTGGACGCCAGCTTTTGGAATCTGTAGCATATATGCATGACTTACGCCTAATCCACACTGACTTGAAGCCAGAAAATATACTTCTTGTTTCTCCTGAATATGTAAAGCTCCCTAGCTCAAAGAGGGTTTCCTCAGATGAAACAGAATTCAGGTGCTTGCCCAAGTCTAGTGCTATTAAGCTGATTGATTTTGGTAGTACTGCATTTGATAATCAGAATCATAGCTCAACTGTTTGTACAAGGCATTACCGGGCCCCTGAGATTATTCTAGGTTTAGGGTGGACATTCCCTTGTGATTTATGGAGTATTGGTTGTATCCTCGTTGAGCTTTGCACGGGTAAAGCACTGTTTCAGACTCATGAAAACTTGGAGCACTTGGCGATGATGGAGAGGGTATTGGGACCTTTACCGGAGCACATGGTTAGAAGGGCTAACCGGGGtgcagaaaaatatttcaggCATGGTTCTCGACTGAATTGGCCCGAAGGAGCTATTTCGAGGGAGAGTATTAGAGCAGTAAAGAAGCTTGATTCTCTGAAGGATCTCATATCACGACGTGTGGAGCACTCAACTTCATCTTTGATCGACTTGTTACATGGTTTACTGAAATATGATCCTACTGAACGTCTAACGGCTCAGCAAGCCCTTGATCATCCCTTCTTTAGGAATCCAACAAGTTA 1181 0.4174 MEKEQMRKRPRLAWDVPPEPEAQRALELGGEGLRKRRASPPKRDDDRDGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTREYVAVKVVRSIKKYRDAAMIEVDVLQRLTKNDRGNSCCVQFRDWFDYRNHICIVFEKLGPSLFDFLKRNKYYPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSPEYVKLPSSKRVSSDETEFRCLPKSSAIKLIDFGSTAFDNQNHSSTVCTRHYRAPEIILGLGWTFPCDLWSIGCILVELCTGKALFQTHENLEHLAMMERVLGPLPEHMVRRANRGAEKYFRHGSRLNWPEGAISRESIRAVKKLDSLKDLISRRVEHSTSSLIDLLHGLLKYDPTERLTAQQALDHPFFRNPTS 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02519 393 Gene3D Phosphorylase Kinase; domain 1 50 143 - -
Bva06g02519 393 SUPERFAMILY Protein kinase-like (PK-like) 50 390 IPR011009 -
Bva06g02519 393 MobiDBLite consensus disorder prediction 28 48 - -
Bva06g02519 393 Pfam Protein kinase domain 63 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02519 393 MobiDBLite consensus disorder prediction 1 15 - -
Bva06g02519 393 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 36 389 - -
Bva06g02519 393 CDD PKc_CLK 50 388 - -
Bva06g02519 393 MobiDBLite consensus disorder prediction 1 48 - -
Bva06g02519 393 PANTHER BNAA07G37640D PROTEIN 36 389 - -
Bva06g02519 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Bva06g02519 393 SMART serkin_6 63 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02519 393 Gene3D Transferase(Phosphotransferase) domain 1 117 388 - -
Bva06g02519 393 ProSiteProfiles Protein kinase domain profile. 63 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02519 Bva-Chr6 15955723 15961017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02519 62 390 Core Cell Cycle Gene Families AT3G48750 25.893 6.08e-28 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Bva06g02519 Pkinase 5.7e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02519 K08287 - gmx:100782453 679.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02519 06 15955723 15961017 Bva06g02519 06 15955723 15961017 ECH