Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02518 ATGCCCACAAGACTCGGTGTTTACATTTCAAAACTCAGAAACCTAACCATAACTTCATCTACATCTCTTGGTCACAATGAGATCAACGTTCCAGGAGAATCCACCGAAGCGTGTCTGATTGAATCGCCCAGGTACCATGACTCACCCAGAGGACTGCATGCATCCCGCCGTTTTCACGTGCCCATGAGCGCGTCCTCGTCAATCTCCGAAGAAGCACGCATGAAGAGTTGGGTGTCCGACAATACACATCTGGAGCACGTAGTGGATGTTGTCGGATTCGTTGGGACCCACAGAGTTGATTCTGAAATTGACTCACACCTGGAAGATACTTCCAGAAGCGCGTGGAATCCTAAAGCTAATGATCTGCCGGATGGTTCGGTCGCCGTGACGGAATATTCTTCAGATCCTTGCCAAGATTTCCTGATGTCCATGCTGGCTATGGTGGATTCCAGAATGGAGCAAAATCTGACCGTTGACTGGAATTACTTAGAGGAGCTTGCGATGTGTTTCTTGGACCTTAATGTCAGCAAATACCACTATCACATATTAAGTGCATATTTTGATTTGCTCATGATATTGCATCGTTCTAGAGTGCTTTCCTA 602 0.4668 MPTRLGVYISKLRNLTITSSTSLGHNEINVPGESTEACLIESPRYHDSPRGLHASRRFHVPMSASSSISEEARMKSWVSDNTHLEHVVDVVGFVGTHRVDSEIDSHLEDTSRSAWNPKANDLPDGSVAVTEYSSDPCQDFLMSMLAMVDSRMEQNLTVDWNYLEELAMCFLDLNVSKYHYHILSAYFDLLMILHRSRVLS 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02518 200 Pfam Transcriptional repressor, ovate 133 192 IPR006458 -
Bva06g02518 200 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 127 194 IPR006458 -
Bva06g02518 200 PANTHER TRANSCRIPTION REPRESSOR OFP14 33 195 - -
Bva06g02518 200 ProSiteProfiles OVATE domain profile. 129 192 IPR006458 -
Bva06g02518 200 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 33 195 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02518 Bva-Chr6 15955636 15956238 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Bva06g02518 Ovate 1.8e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02518 - - csin:114306100 97.4413