Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02493 ATGGCTGTGGAGCTCCTGGGTTTCCCCAAAATAGACGAGCAGAAGGCTATACAGGAGGCCGCATCAGAAGGATTGAAGGGCATGGAGCACATGATCCGGCTCCTCTCACATCAACCCAACCAGATGGACTGCACGGACCTCACCGACGTCACCGTTTCTAAGTTCAAAAAACTCATTTCCCTACTAAACCGGACCGGTCATGCCCGGTTCAGGAGAGGACCGGTTCCCCCTTCTCCCTCTTCAACTCCCTCCGCTTCTAATTCACCACCACCATCATCCGCAACGCCATCCTCCGCCTTTCTTTCACAATCGCCAAATTTAAATCCATCTCCGGTGCAGTTCAATTCACGGGCGACCGTTGCTCCAGTGTCGATCGTAAATCCGGTGACTGTTCGCCATGTTCCGGTCAATACTCCCACGAGTTTCGTTCCCACTCAGTCACAGAGTTTGACTCTTGATTTTACCAAACCAAATATTTTGAGTTCGAACACAAAGTCCCTGGAACTCGAGTTCTCGAAAGAGACGTTTAGTGTGTCCTCAAATTCATCGTTCATGTCGTCAGCCATCACTGGCGACGGCAGCGTTTCTAACGGTAAACAAGGATCGTCGATTTTTTTGACTCCGGCGGCACCGACGGTGTCCGGTGGGAAGCCACCTCTGTCAGCACCATCATTCAAGAAGAGGTGCCACGACCACCGCGAGCACTCCGATGACCTCTCCGGCAAACAATCCGGCTCCAGCAAGTGCCACTGCATCAAGAGAAGaaaAAATCGGATGAAGAGGACGATTCGAGTTCCGGCGATTAGTTCGAAGATCGCCGATATTCCGCCGGACGAGTACTCATGGCGCAAGTACGGTCAGAAGCCGATCAAGGGGTCACCATATCCACGTGGCTATTACAAGTGCAGTACAGTGAGAGGGTGTCCAGCAAGGAAACACGTGGAGAGGGCCCACGATGATCCAACAATGCTTATTGTGACGTACGAGGGGGAGCACCGTCACGGGATCCAGACCACGATGCAGGAGAACGTGAGTGGGACTGTTGATCTGGTATTCGAGTCAACGTG 1067 0.5258 MAVELLGFPKIDEQKAIQEAASEGLKGMEHMIRLLSHQPNQMDCTDLTDVTVSKFKKLISLLNRTGHARFRRGPVPPSPSSTPSASNSPPPSSATPSSAFLSQSPNLNPSPVQFNSRATVAPVSIVNPVTVRHVPVNTPTSFVPTQSQSLTLDFTKPNILSSNTKSLELEFSKETFSVSSNSSFMSSAITGDGSVSNGKQGSSIFLTPAAPTVSGGKPPLSAPSFKKRCHDHREHSDDLSGKQSGSSKCHCIKRRKNRMKRTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAHDDPTMLIVTYEGEHRHGIQTTMQENVSGTVDLVFEST 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02493 355 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 9 354 IPR044810 GO:0003700
Bva06g02493 355 Gene3D WRKY domain 263 336 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva06g02493 355 SUPERFAMILY WRKY DNA-binding domain 274 336 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva06g02493 355 ProSiteProfiles WRKY domain profile. 271 337 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva06g02493 355 Pfam Plant zinc cluster domain 226 274 IPR018872 -
Bva06g02493 355 MobiDBLite consensus disorder prediction 76 90 - -
Bva06g02493 355 MobiDBLite consensus disorder prediction 224 241 - -
Bva06g02493 355 Pfam WRKY DNA -binding domain 278 334 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva06g02493 355 MobiDBLite consensus disorder prediction 91 113 - -
Bva06g02493 355 MobiDBLite consensus disorder prediction 191 209 - -
Bva06g02493 355 MobiDBLite consensus disorder prediction 68 113 - -
Bva06g02493 355 SMART WRKY_cls 276 336 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva06g02493 355 MobiDBLite consensus disorder prediction 191 253 - -
Bva06g02493 355 PANTHER WRKY TRANSCRIPTION FACTOR 17-RELATED 9 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02493 Bva-Chr6 15830552 15831319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02493 1 354 WRKY Transcription Factor Family AT2G24570 59.116 1.12e-125 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva06g02493 WRKY 1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02493 - - tcc:18587637 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02493 06 15830552 15831319 Bva06g02493 06 15830552 15831319 ECH