Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02484 ATGCCAACCATGGGCGGCGACAAGGGTATCAGCCTCGAGGAGATCAAAAACGAGAACGTCGATTtgGAACGGATTCCGCTTGAGGAAGTGTTTGAGCAGCTGAAATGTTCAAGGGAAGGTCTAACATCCGACGAAGGGGCCAATCGGCTTCAAGTTTTTGGACCAAACAAattggaagagaaaaagGAGAGCaagtttttgaagtttttgggTTTTATGTGGAACCCGTTATCCTGGGTCATGGAAGCTGCTGCAATAATGGCTATTGCTTTGGCAAATGGCGGTGGAAGGCCTCCGGACTGGCAAGACTTCGTGGGTATCATTGCTCTACTTCTGATCAACTCCACAATCAGTTTTATAGAGGAAAACAATGCCGGCAATGCTGCGGCAGCACTCATGGCTGGATTAGCTCCCAAGACTAAGGTTCTCAGAGATGGCCGATGGAGTGAACAAGATGCTGCAATTTTAGTTCCAGGAGACATAATCAGCATTAAGTTAGGCGATATTATTCCCGCCGATGCTCGTCTTCTTGAGGGTGATCCTTTGAGTATTGATCAATCTGCTCTAACTGGAGAATCTCTTCCTGTGACGAAGAGTTCATCAGATGAAGTATTTTCGGGTTCAACTGTCAAAAAGGGTGAGATAGAGGCAGTTGTTATTGCTACTGGTGTGCACACATTTTTTGGCAAAGCAGCCCATCTAGTGGACAGCACCAATCAAGTTGGGCACTTCCAGAAAGTTCTTACGGCAATTGGTAATTTCTGCATTTGCTCAATAGCCGTTGGAATAGTCGTTGAGCTCATTGTCATGTACCCTATACAGCATCGCGAGTACAGAGATGGAATTGATAATCTCTTGGTTCTCTTGATTGGAGGAATTCCAATTGCCATGCCTACTGTTTTGTCTGTCACTATGGCTATTGGTTCTCACAGGCTCTCTCAGCAAGGTGCAATTACAAAGCGAATGACAGCTATTGAGGAAATGGCAGGGATGGATGTTCTCTGCAGTGACAAAACTGGAACTCTTACCCTTAATAAACTATCCGTTGATAAAACCTTGATCGAAGTGTTTGCAAAGGGTGTTGAAAAGGACTACGTCATCCTTCTTGCGGCAAGGGCTTCTAGGACTGAGAATCAGGATGCCATAGATGCTGCAATTGTTGGGATGCTTGCAGATCCAAAAGAGGCACGGGCTGGTGTCAGGGAGGTGCATTTTCTTCCCTTCAATCCTGTAGACAAGAGGACTGCTCTAACCTACATTGATTCTGATGGAAGCTGGCATCGAGCTAGTAAAGGTGCTCCTGAGCAGATTTTGAACCTTTGCAATTGCAAAGAGGATGTCAGGAGAAAAGCTCACGCTGTGATCGATAAGTTTGCTGAGCGTGGACTCCGTTCTTTAGCTGTTGGAAGACAGGAAGTACCCGAGAAATCGAAAGACGCTCCCGGTGCACCCTGGCAATTTGTTGGTCTGTTACCTCTGTTTGATCCCCCTAGACATGATAGTGCTGAAACCATCAGAAGAGCTCTTCACCTTGGTGTGAATGTTAAGATGATTACTGGGGATCAGCTTGCAATTGCCAAGGAAACTGGCCGAAGGCTAGGAATGGGGACAAATATGTACCcttcttcttcattgcttGGCCAAGACAAGGATGCTTCTATTTCAGCTCTTCCTGTCGACGAGTTGATTGAGAAGGCTGACGGATTTGCAGGAGTGTTTCCCGAACACAAATATGAAATCGTTAAGAGGCTGCAAGAGAGGAAGCATATCTGTGGAATGACAGGAGATGGTGTCAATGATGCCCCTGCATTAAAGAGAGCAGACATTGGAATTGCTGTTGCCGATGCTACTGATGCTGCTAGAAGTGCTTCTGACATTGTCCTTACCGAACCTGGGTTGAGCGTCATTGTTAGTGCTGTGCTCACCAGCCGAGCAATTTTCCAAAGGATGAAGAACTACACTATCTATGCTGTATCAATCACCATTCGAATTGTGTTTGGTTTCCTGTTTATCGCATTGATCTGGAAGTTTGATTTTGCTCCCTTCATGGTTCTGATCATTGCCATACTAAACGATGGTACCATTATGACGATATCCAAGGATCGAGTGAAACCATCTCCACTACCAGACAGCTGGAAACTTAGGGAGATATTTGCCACTGGCGTTGTGCTTGGTAGTTACATGGCTTTAATGACAGTGGTATTTTTCTGGGCTATGAATGACACTGACTTCTTCCcgAACAAGTTTAATGTGAGGAGAATCAGGGATAATGAGCATGAAATGATGGCAGCGTTATACCTACAAGTCAGTATTATAAGCCAGGCTCTAATTTTTGTTACTAGGTCCCGCAGTTGGTCCTTTGTTGAGAGGCCTGGACTACTCCTACTGGGTGCTTTTATGATTGCTCAGCTGGTGGCAACTCTGATAGCAGTCTATGCCAACTGGGGCTTCGCACGAATAAAGGGAATGGGATGGGGTTGGGCTGGAGTAATCTGGCTCTACAGTATAGTGACATATATCCCTCTTGATTTACTCAAATTTGCAATCCGCTATGTTCTGAGTGGGAAGGCATGGGATAATCTTCTGGAAAATAAGACTGCCTTCACTACAAAGAAAGATTATggcaaagaagagagagaagcacAATGGGCGGCTGCACAGAGGACTCTCCATGGTCTTCAGCCACCAGAAAACTCCAACCTTTTCAATGACAAGAATAATTACAGGGAACTTTCAGAGATTGCAGAGCAAGCCAAGCGTCGTGCTGAGGTTGCAAGGCTTAGGGAACTACATACTCTGAAGGGACATGTTGAGTCAGTGGTGAAGCTGAAGGGACTTGACATCGACACAATTCAGCAACATTACACAGTATA 2873 0.4438 MPTMGGDKGISLEEIKNENVDLERIPLEEVFEQLKCSREGLTSDEGANRLQVFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGRPPDWQDFVGIIALLLINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGRWSEQDAAILVPGDIISIKLGDIIPADARLLEGDPLSIDQSALTGESLPVTKSSSDEVFSGSTVKKGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVVELIVMYPIQHREYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKTLIEVFAKGVEKDYVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGSWHRASKGAPEQILNLCNCKEDVRRKAHAVIDKFAERGLRSLAVGRQEVPEKSKDAPGAPWQFVGLLPLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGQDKDASISALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVFGFLFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLREIFATGVVLGSYMALMTVVFFWAMNDTDFFPNKFNVRRIRDNEHEMMAALYLQVSIISQALIFVTRSRSWSFVERPGLLLLGAFMIAQLVATLIAVYANWGFARIKGMGWGWAGVIWLYSIVTYIPLDLLKFAIRYVLSGKAWDNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPENSNLFNDKNNYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02484 957 ProSitePatterns E1-E2 ATPases phosphorylation site. 337 343 IPR018303 -
Bva06g02484 957 SMART Cation_ATPase_N_a_2 21 93 IPR004014 -
Bva06g02484 957 Pfam E1-E2 ATPase 137 314 - -
Bva06g02484 957 Pfam haloacid dehalogenase-like hydrolase 331 608 - -
Bva06g02484 957 Gene3D - 332 631 IPR023214 -
Bva06g02484 957 PANTHER CALCIUM-TRANSPORTING ATPASE 9 937 - -
Bva06g02484 957 Gene3D - 100 821 - -
Bva06g02484 957 PRINTS H+-transporting ATPase (proton pump) signature 594 610 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva06g02484 957 PRINTS H+-transporting ATPase (proton pump) signature 625 650 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva06g02484 957 PRINTS H+-transporting ATPase (proton pump) signature 766 787 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva06g02484 957 PRINTS H+-transporting ATPase (proton pump) signature 566 582 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva06g02484 957 PRINTS H+-transporting ATPase (proton pump) signature 451 469 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva06g02484 957 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 40 812 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bva06g02484 957 Gene3D - 347 494 IPR023299 GO:0000166
Bva06g02484 957 SUPERFAMILY Calcium ATPase, transduction domain A 138 235 IPR008250 -
Bva06g02484 957 SFLD Haloacid Dehalogenase 317 646 - -
Bva06g02484 957 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 569 684 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva06g02484 957 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 107 354 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva06g02484 957 Coils Coil 908 928 - -
Bva06g02484 957 Gene3D - 138 222 - -
Bva06g02484 957 CDD P-type_ATPase_H 40 847 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bva06g02484 957 Pfam Cation transporter/ATPase, N-terminus 25 87 IPR004014 -
Bva06g02484 957 SUPERFAMILY Calcium ATPase, transmembrane domain M 20 853 IPR023298 -
Bva06g02484 957 SUPERFAMILY HAD-like 331 641 IPR036412 -
Bva06g02484 957 Gene3D - 906 957 - -
Bva06g02484 957 PANTHER PLASMA MEMBRANE ATPASE 9 937 - -
Bva06g02484 957 SFLD p-type atpase 317 646 IPR044492 -
Bva06g02484 957 PRINTS P-type cation-transporting ATPase superfamily signature 594 613 - -
Bva06g02484 957 PRINTS P-type cation-transporting ATPase superfamily signature 617 629 - -
Bva06g02484 957 PRINTS P-type cation-transporting ATPase superfamily signature 511 521 - -
Bva06g02484 957 PRINTS P-type cation-transporting ATPase superfamily signature 185 199 - -
Bva06g02484 957 PRINTS P-type cation-transporting ATPase superfamily signature 489 500 - -
Bva06g02484 957 PRINTS P-type cation-transporting ATPase superfamily signature 335 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02484 Bva-Chr6 15789460 15796791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02484 11 957 Primary Pumps ATPases AT3G42640 84.372 0.0 1635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02484 K01535 - gmx:100791692 1740.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00283 10 3713263 3719668 Bva06g02484 06 15789460 15796791 BWGD