Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02476 ATGTTTTCCAGCAGCCAGTTTGACTCCAACTCTGCCTTCTCCGGTGGTGGTTTCATGACCACTCAGGCAACCCAGTTTAACTATTCATCCCCATCACCAGCAAAAGTTAGCGATCTTTCTTATCTCTTGTTCTCTTTCTCCAATTTCCGTTTGTCTATTCGCTGTTTGatttactctttttcctttccttcacaTGGCGCTTCTTGGTTAATGACCCGGGAAACTCATGGTTTGGTTCCAGTAACAGTGAAGCAGATAAGCGAAGCCTCTCATTCCGGCTATGAAAAGTCGAGCTTCGTTATCAACTGTGTTGATTTGACCAATgTCACCTTGGTTGGAATGGTGTTTGAGAAAGCTGTAAGAACTACTGATGTTGGTTTCATTCTAGACGATGGAACAGGACGAATTAAATGTCAAAGATGGGCTGCTTGTTTGTCTAGGGTGAACGAGACTTTTGATGCAAACCAAAGGGATGAAATACAAGATGGTATGTACGTTCGTGTTTATGGGCATTTGAAAAGTTTTCAAGGTGTGACACAATTGGTTGCCTTCTCTTTCAGCTG 563 0.4103 MFSSSQFDSNSAFSGGGFMTTQATQFNYSSPSPAKVSDLSYLLFSFSNFRLSIRCLIYSFSFPSHGASWLMTRETHGLVPVTVKQISEASHSGYEKSSFVINCVDLTNVTLVGMVFEKAVRTTDVGFILDDGTGRIKCQRWAACLSRVNETFDANQRDEIQDGMYVRVYGHLKSFQGVTQLVAFSFS 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02476 187 Gene3D - 74 187 IPR012340 -
Bva06g02476 187 Pfam OB-fold nucleic acid binding domain 109 183 IPR004365 GO:0003676
Bva06g02476 187 SUPERFAMILY Nucleic acid-binding proteins 78 186 IPR012340 -
Bva06g02476 187 PANTHER REPLICATION PROTEIN A 32 KDA SUBUNIT A 71 185 - -
Bva06g02476 187 PANTHER REPLICATION PROTEIN A-RELATED 71 185 IPR040260 -
Bva06g02476 187 CDD RPA2_DBD_D 108 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02476 Bva-Chr6 15760637 15762333 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02476 1 185 Core DNA Replication Machinery Family AT2G24490 47.312 1.28e-45 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02476 K10739 - gmx:100802512 187.963