Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02475 atgtatTTTTGGATTGTGACAAATTttgatgagattttttttcactttattgaCTGCATACATAACAACTTCCAATGCGACTCAAAGGTAGAAGGAATCACTCCCCCTCAACTTGTGTCATCAGACTCATTGAACAATCCGgtgaaaaatttatcaaatggaTACCAGCCTCCTTCGTCAAATCCGTCATATGCACAAAATAGCATGGATGGACTGAAGGATTGTGATAAATTGGTTCTTGATTATCTACAGCAGCATTCAGATATGTCAGATGGAAGGGGAATACATATTGATGAACTTTCTCGAGGGCTTAAACTTCCATTGGACAAGATCATGTcatcccttttctttctttttgtctctCTGTGTATGTCTGTACCTGGTACACGCGACTTAACTGTAGCTGTTTATGATGACATGTTGTCCCAGAAGACTCTTGGAGATGATGGTTTGGCATACTCTACCATCGACGACTTCCATTATAAGCAAGCTTG 494 0.3482 MYFWIVTNFDEIFFHFIDCIHNNFQCDSKVEGITPPQLVSSDSLNNPVKNLSNGYQPPSSNPSYAQNSMDGLKDCDKLVLDYLQQHSDMSDGRGIHIDELSRGLKLPLDKIMSSLFFLFVSLCMSVPGTRDLTVAVYDDMLSQKTLGDDGLAYSTIDDFHYKQA 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02475 164 Pfam Replication protein A C terminal 45 115 IPR014892 -
Bva06g02475 164 PANTHER REPLICATION PROTEIN A 32 KDA SUBUNIT A 140 164 - -
Bva06g02475 164 PANTHER REPLICATION PROTEIN A 32 KDA SUBUNIT A 6 117 - -
Bva06g02475 164 PANTHER REPLICATION PROTEIN A-RELATED 140 164 IPR040260 -
Bva06g02475 164 PANTHER REPLICATION PROTEIN A-RELATED 6 117 IPR040260 -
Bva06g02475 164 Gene3D - 65 120 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02475 Bva-Chr6 15758963 15761465 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02475 6 162 Core DNA Replication Machinery Family AT2G24490 30.061 6.26e-16 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02475 K10739 - gmx:100802512 164.851