Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02447 ATGGGGGTGGACTACTACAATATATTGAAGGTTAACAGAAATGCGACAGATGACGATCTGAAGAAATCATATAGAAGGTTGGCCATGAAATGGCATCCTGACAAGAACcccaacaacaaaaaagaagctGAAGCCAAATTCAAGCAGATCTCTGAAGCTTACGAGGTATTGAGTGACCCTCAGAAAAGGGTTGTTTATGATCAGCATGGAGAGGAAGGATTGAAAAATATGCCACCACCTGGCAGTGGTGGTCCATCTGGCGATGGACAATTTAATCCTCGAAACGCAGAGGATATTTTCGCAGAATTCTTTGGGAGTAGCCCTTTCGGATTTGGATCATCTGGACCTGGCAGGTCAATGAGGTTTCAGGCCGATGGAGGAATATTTGGTGGAAGTGACAATATTTTTCGAACTTATAATAATGAAGGTGGATATACACCAAAGAAGCCACCACCTGTGGAGACCAAATTGCCTTGCACCCTGGAGGAGTTGTACTCTGGATCAacaaggaaaatgaagatCTCAAGGGCTGTGATGGATGCCAATGGAAGGCAAGTTCCAGAATCGGAGATATTAACCATTGATATAAAGCCCGGGTGGAAGAAGGGAACCAAGATTACTTTCCCAGATAAGGGAAACCAGCAACCAAATCAACTGCCAGCAGACCTTGTATTTGTGATCGATGAGAAGCCTCATGATGCCTTTAAGAGAGATGGCAACGACCTCATTGTGAGTAAAAGGGTGACACTAGCAGAGGCTCTTGGAGGAACAACAGTAAACCTCACAACACTTGATAAACGTGATCTATCAATCCCAGTGACCGACATTGTCAGCCCAGGTTATGAGCTTCTCGTTGCAAAGGAAGGAATGCCAATTACAAAAGAGCCTGGTAATAGGGGCGATTTGaggatcaaatttgaagtgaAATTCCCTACAAGATTGACGCCCGAGCAACGAGCCGGACTAAGAAGTGCATTGGGTGGTTG 986 0.428 MGVDYYNILKVNRNATDDDLKKSYRRLAMKWHPDKNPNNKKEAEAKFKQISEAYEVLSDPQKRVVYDQHGEEGLKNMPPPGSGGPSGDGQFNPRNAEDIFAEFFGSSPFGFGSSGPGRSMRFQADGGIFGGSDNIFRTYNNEGGYTPKKPPPVETKLPCTLEELYSGSTRKMKISRAVMDANGRQVPESEILTIDIKPGWKKGTKITFPDKGNQQPNQLPADLVFVIDEKPHDAFKRDGNDLIVSKRVTLAEALGGTTVNLTTLDKRDLSIPVTDIVSPGYELLVAKEGMPITKEPGNRGDLRIKFEVKFPTRLTPEQRAGLRSALGG 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02447 328 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Bva06g02447 328 SUPERFAMILY Chaperone J-domain 3 114 IPR036869 -
Bva06g02447 328 MobiDBLite consensus disorder prediction 71 94 - -
Bva06g02447 328 CDD DnaJ 4 59 IPR001623 -
Bva06g02447 328 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 328 - -
Bva06g02447 328 Gene3D - 231 326 - -
Bva06g02447 328 PRINTS DnaJ domain signature 42 62 IPR001623 -
Bva06g02447 328 PRINTS DnaJ domain signature 24 39 IPR001623 -
Bva06g02447 328 PRINTS DnaJ domain signature 6 24 IPR001623 -
Bva06g02447 328 PRINTS DnaJ domain signature 62 81 IPR001623 -
Bva06g02447 328 SMART dnaj_3 3 62 IPR001623 -
Bva06g02447 328 Pfam DnaJ C terminal domain 153 311 IPR002939 -
Bva06g02447 328 SUPERFAMILY HSP40/DnaJ peptide-binding domain 235 320 IPR008971 GO:0006457|GO:0051082
Bva06g02447 328 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 1 328 - -
Bva06g02447 328 Pfam DnaJ domain 4 67 IPR001623 -
Bva06g02447 328 Gene3D - 152 230 - -
Bva06g02447 328 Gene3D DnaJ domain 3 114 IPR036869 -
Bva06g02447 328 SUPERFAMILY HSP40/DnaJ peptide-binding domain 152 233 IPR008971 GO:0006457|GO:0051082
Bva06g02447 328 CDD DnaJ_C 151 314 - -
Bva06g02447 328 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02447 Bva-Chr6 15633715 15636334 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02447 5 69 C2H2 Transcription Factor Family AT1G74250 42.029 1.09e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02447 K09510 - csv:101204033 522.702