Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02443 AtggataaagaaaacaaaatttgtgcAAAATATGAAGAGCATTCAGTCCGAATCACTCGAGCAAGGGCTAGGGCCTTGGGATCAATTGGAGGGATACCTCCCTCCTCAAGACCATCATTTAAACCAGAACAGAAGCGTGTCCTTCGggcaaattacaaaaaaggaGCATCTGATGAGAATAAAACTTCTGTGGCTGCCCCTGCTGGTCTTCAGCATAAGAGGAAGGCAGTGCTTACAGATGTAACTAACCTCAgtgaaatatcatataataagaTCATTAATGCGTCAAAATTTCAGGCAAGAAGAGGTCATACGAGGAAAAACATGAAGCTAGCTGTAGATGTCTCCAGAGAAGTCCCGTCAATGCAAGAGGATGTTAAAACAAAGTTAGCTGAAGAATTATCCAAAATACGGATGGTAGAATCACATGACACTACCATTGCAGTAAGGCTGGCAGATAAAGAACCACTACAAAATAGTGCGTCCAGTAGGATGAGAGAAAGTGTTTTAGCAGATCCCATGCTTTCAATGCGGGACTCCACAAAGCCTGGTGAACCCCTTAGCCCTCCATATAAAGACATAGATATGATCCGTGAAAAATCACGAGCCTCAGATGACATGGGCATTGTGGACATTGATTCAGAGTTAAAAGATCATCAAATGTGGAGTTTATATGCTGCTGATATATACAGCAATATACGTGTTACAGAGCTTGAAAGGAGACCATCAGTCGATTACATGGACAAGTTGCAGCAAGATATCACTCCAAGCATGCGGGCAATTCTAATTGATTGGCTTGTGGAGGTTTCTGAAGAATATAAGCTTGTTCCGGACACTCTCTACCTTACAGTAAATCTCATTGATCGGTTTCTATCGATGATTTTGATTCAGAAACAAAGGCTCCAGCTGCTTGGTGTTACTTGTATGCTGATTGCGTCaaaatatgaagaaatttgCCCTCCTCGAGTCGAAGAATTTTGCTTCATTACAGACAGTACTTACACGAGAGAAGAGGTACTGAAAATGGAGAGTGAGATTTTAAATGTACtgcattttcaattatttgttcCCACCATCAAAACTTTTCTCAGGAGATTCATCCAAGCAGCACAAACTTCTGACAAgGTTCAGTGTGTTGAACTGGAATACCTAGCAAATTATTTAGCAGAGCTTACTCTTGTCGAATACAGCTTCCTGAAGTTCCTACCTTCCATGATTGCTGCATCTGCTGTGTTTCTTGCGAGATGGACGCTCAACCAATCACACCACCCGTGGaaCCCAACTCTGCAGCACTACACAAATTACGAAGTGTCAGATCTTAAAACCACAGTTCTCGCATTGGAAGATCTGCAGCTTAATACCAAAGGCTATTCCCTGAATGCCATACGTGAAAAATATAGACAACAGAAGTTCAAGTGTGTGGCAGCATTGTCTCCAAAATCGGTGTCATCACTCTTCTA 1460 0.3973 MDKENKICAKYEEHSVRITRARARALGSIGGIPPSSRPSFKPEQKRVLRANYKKGASDENKTSVAAPAGLQHKRKAVLTDVTNLSEISYNKIINASKFQARRGHTRKNMKLAVDVSREVPSMQEDVKTKLAEELSKIRMVESHDTTIAVRLADKEPLQNSASSRMRESVLADPMLSMRDSTKPGEPLSPPYKDIDMIREKSRASDDMGIVDIDSELKDHQMWSLYAADIYSNIRVTELERRPSVDYMDKLQQDITPSMRAILIDWLVEVSEEYKLVPDTLYLTVNLIDRFLSMILIQKQRLQLLGVTCMLIASKYEEICPPRVEEFCFITDSTYTREEVLKMESEILNVLHFQLFVPTIKTFLRRFIQAAQTSDKVQCVELEYLANYLAELTLVEYSFLKFLPSMIAASAVFLARWTLNQSHHPWNPTLQHYTNYEVSDLKTTVLALEDLQLNTKGYSLNAIREKYRQQKFKCVAALSPKSVSSLF 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02443 486 Pfam Cyclin, N-terminal domain 228 354 IPR006671 -
Bva06g02443 486 PANTHER CYCLINS 52 486 IPR039361 -
Bva06g02443 486 SMART cyclin_7 361 449 IPR013763 -
Bva06g02443 486 SMART cyclin_7 264 348 IPR013763 -
Bva06g02443 486 Gene3D - 242 355 - -
Bva06g02443 486 SMART Cyclin_C_2 357 480 IPR004367 -
Bva06g02443 486 Pfam Cyclin, C-terminal domain 357 479 IPR004367 -
Bva06g02443 486 CDD CYCLIN 258 347 IPR013763 -
Bva06g02443 486 SUPERFAMILY Cyclin-like 217 354 IPR036915 -
Bva06g02443 486 PIRSF Cyclin_A_B_D_E 35 485 IPR039361 -
Bva06g02443 486 PANTHER CYCLIN-A2-4 52 486 - -
Bva06g02443 486 SUPERFAMILY Cyclin-like 356 479 IPR036915 -
Bva06g02443 486 CDD CYCLIN 356 447 IPR013763 -
Bva06g02443 486 ProSitePatterns Cyclins signature. 259 290 IPR006671 -
Bva06g02443 486 Gene3D - 228 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02443 Bva-Chr6 15612017 15617220 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02443 3 486 Core Cell Cycle Gene Families AT5G25380 55.918 6.36e-165 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02443 K06627 - gmx:547780 610.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00323 10 3973368 3979379 Bva06g02443 06 15612017 15617220 BWGD