Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02439 ATGGCTCAACATAAAAATGGCAGCAACAGTCCAAGCGAAAAGTTAGCCTTCCATGACTTCCTGGGCATGAAGCCTACTGATTCGCCTGTGGTTTTGGCTCCTAAAACCGCCGATGTGAGGCTGTCCGAGGCGTCGCCGTCGTCGGCATCGCTGTCTGTTGGCGCCTCTTCTGGTGGTGCCCGTGGTCCCTTCTCAACTACTTCTGATATTGGTTCCGaaaggCAGGTAGGAAATCATCTCGAGGGAGTTCCTTTCTATGGCCCAAGGAGTGATTTTTCTGGCACTGAGATAAGTAACAGACTAATAGGAAGCAAGCGATGTAATTCTGATTCCACCTTTATGGGTTCCTCCAGAGATGCCTTCCAGATGGTTCCTGACTCCCTTCAAAACTCACATTTGATGAAGATGCTCCGTAATGCAGCTGGAGGAGAGCGACATAGAAGGTCTAATGATGATGAAGTGTTTATGGGTATGCAGCCTCTGAAGCCAACTTCTGCATCTCAGATGTTTCAGCATCCCAGCGGCACTAAGATTGATGCCAATAAATGGGAACGATCTGTTCTCATGAACGTTGCCCCTTCCATGCAGCATCCACCACGTGGAGGTCAATTGGCACCTTTTGTCCACCAGATAGGTTCAAACAAGATCAGGGATACCAATGCTGGTCCTTCATTCATCTCTCAGTCTGCTGCTGATGAAGGTTCTCGAACTGGAATCAAGGGCCCTGGAATTTTGAGTTCTATAAACACAAACACTCCTGCCTCTGAGAAAATGCCATCTGCAGTGCTGCTTGGTGGAAGCAGGCCAAAGCCTGTAATTAATGTAGTAGACCCAGAATCTTCCACACCTCCAAGtCGACATGGGTTGACATCTGCTAACCGCCAGATGACAATATTTTATGGAGGTCAAGCTCACGTGTTTGATGATGTCCATCCCAATAAGGCAGACATTATAATGGCTTTAGCCGGATCAAATGGTGGATCTTGGTCCACAAAATACTCTCCTAAATCTACTGCGAAGCCGGTAAGTGATAGTAACTTGCCAACTGGAGAAAATGAAACCGCGGGCACGGGGGCATGGCAAGTAACTTGGTACTCCCTCAGGAACTCCACGGCAGATTATCCATCACTGCCACTTGTAATCATGCCACAGCTACTGGCTCTGGCGATCGACTATCTACTCCGGCACCAGCAGCAGGGGCACATCAGGGAAGCATTGTGGCGAAGGAAACAAGAAGGGCAGTCCAAGTA 1250 0.4856 MAQHKNGSNSPSEKLAFHDFLGMKPTDSPVVLAPKTADVRLSEASPSSASLSVGASSGGARGPFSTTSDIGSERQVGNHLEGVPFYGPRSDFSGTEISNRLIGSKRCNSDSTFMGSSRDAFQMVPDSLQNSHLMKMLRNAAGGERHRRSNDDEVFMGMQPLKPTSASQMFQHPSGTKIDANKWERSVLMNVAPSMQHPPRGGQLAPFVHQIGSNKIRDTNAGPSFISQSAADEGSRTGIKGPGILSSINTNTPASEKMPSAVLLGGSRPKPVINVVDPESSTPPSRHGLTSANRQMTIFYGGQAHVFDDVHPNKADIIMALAGSNGGSWSTKYSPKSTAKPVSDSNLPTGENETAGTGAWQVTWYSLRNSTADYPSLPLVIMPQLLALAIDYLLRHQQQGHIREALWRRKQEGQSK 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02439 416 MobiDBLite consensus disorder prediction 43 72 - -
Bva06g02439 416 PANTHER PROTEIN TIFY 8 58 357 - -
Bva06g02439 416 Pfam tify domain 291 323 IPR010399 -
Bva06g02439 416 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 58 357 IPR040390 -
Bva06g02439 416 SMART tify_2 289 324 IPR010399 -
Bva06g02439 416 MobiDBLite consensus disorder prediction 228 258 - -
Bva06g02439 416 MobiDBLite consensus disorder prediction 329 354 - -
Bva06g02439 416 MobiDBLite consensus disorder prediction 242 257 - -
Bva06g02439 416 ProSiteProfiles Tify domain profile. 289 324 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02439 Bva-Chr6 15599412 15603635 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02439 1 322 Tify Gene Family AT4G32570 39.942 2.29e-57 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Bva06g02439 tify 1.5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02439 - - gmx:100807222 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00327 10 3988698 3993363 Bva06g02439 06 15599412 15603635 BWGD