Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02430 ATGGAGGAAATTGAAGGGCCTAATAGCAGTGAAACTAGGAGCTCCAGTGAGAGTCGACCTCCAAATCCTCTTACTGCCTCGTATCGTCAATGTCTCAACACTGACCGTGTTGCGGTGCCATGCAAGAAATCACTTGTTCGACACCCTTCTCTTATGAGGATGAAGGCGTCTGATGCATCTGCCGAGTCAGGAAATGTTATGGAAGTTTGTGGGTCCGAATTCTTTCCTAAGCTCCGTTCTGGAGCATGGTCTGATATTGGGTTTCGGTCTAGCATGGAAGATGTGTATGTTTGTTTGGATGACTTCAAGCAGGACTACGGGCATAATAACCGTATAGATGGACCTAGTGCTTTCTATGGGGTATTTGATGGACATGGTGGAAAGCATGCTGCTGATTTTGTATGTTATCATTTGCCAAAGTTCATTGTCGACAATGAAGATTTCCCAGAGGATATTGAAAGGATTATTTCTTCAGCATTTCTTGAAACTGACGCtgcttttgcagaagcttGCTCTCTTGACATGGCTCTTGCCTCTGGCACCACTGCATTGGCCGCTCTTGTAATTGGAAGATTGCTGGTGGTGGCTAATGCTGGAGATTGTCGAGCAGTGCTTTGCCGCCGTGGAAAAGCAATTGAAATGTCAAGGGATCACAAACCGATGTGCAGCAAAGAGAGAAAGCGCATCGAGGCATCCGGGGGCTATGTGTACGATGGATATCTTAATGGACAACTTAACGTTGCTCGTGCTCTCGGTGATTGGCACATGGAAGGAATGAAAGGCAGGGATGGTGGACCACTCAGCGCAGACCCTGAACTGATAAGCAGAGAACTAACTGAGGAGGATGAATTTCTCATCATAGGTTGCGATGGGATTTGGGATGTATTTAGGAGCCAAAATGCGGTGGATTTCGCTCGCCGCAGGCTTCAGGAGCATAATGACCCAGTCATGTGTGGCAAGGATCTGGTTGACGAGGCTATGAAGAGAAAGAGCGGAGACAATTTAGCCGTCGTTGTGGTGTGCTTCCAGCAGCAAGCGCCGCCAAATTTGGTGGCACCACGTTCCAGAGTGCACAGGAGTTTCTCCGCTGAAGGTTTGAGGGAGTTGCAAAGCTTTTTGGATAGCCTGAGTAATTG 1136 0.4718 MEEIEGPNSSETRSSSESRPPNPLTASYRQCLNTDRVAVPCKKSLVRHPSLMRMKASDASAESGNVMEVCGSEFFPKLRSGAWSDIGFRSSMEDVYVCLDDFKQDYGHNNRIDGPSAFYGVFDGHGGKHAADFVCYHLPKFIVDNEDFPEDIERIISSAFLETDAAFAEACSLDMALASGTTALAALVIGRLLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRIEASGGYVYDGYLNGQLNVARALGDWHMEGMKGRDGGPLSADPELISRELTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPVMCGKDLVDEAMKRKSGDNLAVVVVCFQQQAPPNLVAPRSRVHRSFSAEGLRELQSFLDSLSN 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02430 378 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 65 364 - -
Bva06g02430 378 CDD PP2Cc 79 342 IPR001932 -
Bva06g02430 378 Gene3D - 61 348 IPR036457 -
Bva06g02430 378 SUPERFAMILY PP2C-like 72 343 IPR036457 -
Bva06g02430 378 MobiDBLite consensus disorder prediction 1 27 - -
Bva06g02430 378 SMART PP2C_4 69 340 IPR001932 -
Bva06g02430 378 Pfam Protein phosphatase 2C 87 334 IPR001932 -
Bva06g02430 378 ProSiteProfiles PPM-type phosphatase domain profile. 79 342 IPR001932 -
Bva06g02430 378 PANTHER PROTEIN PHOSPHATASE 2C 65 364 IPR015655 GO:0004722|GO:0006470
Bva06g02430 378 MobiDBLite consensus disorder prediction 8 27 - -
Bva06g02430 378 ProSitePatterns PPM-type phosphatase domain signature. 118 126 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02430 Bva-Chr6 15555466 15559002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02430 1 378 PP2C-type Phosphatase Gene Family AT2G25620 67.347 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Bva06g02430 PP2C 7.4e-69 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02430 K14803 - zju:107421256 624.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02430 06 15555466 15559002 Bva06g02430 06 15555466 15559002 ECH