Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02421 ATGAAGAAGATGGTGGGCATTTCAATATGGGGGAATAAAGGGGACCAAGAGTTAGACAAGGAGCAGATGTCCAGGGACGACGGTAGCTACTATAGCCTTACCGGTATCCCTCTTCCTGCTCTTGGCGCCAATGCCAGCAAAACTCGAAGACCCAAGCTTCGACCATTTATTATCTCTCCCTCCAATTCTCGTTACAgACTCTGGCAGACATTTTTGGTCCTTTTAGTTTTCTACACAGCTTGGGTTTGCCCGTTTGAATTTGGATTTATTCCGGAAATACCAAAAAGTCTTACTATAGCTGATAACGTTGTAAATGGATTTTTTGCCATTGACATTGTTCTGACGTTTTTCGTTGCCTACCTTGAAAAATCTAGTTATCTACTCATTGATAACCCTAAACTGATTGCTTTACGATATGCCAAAACCTGGTTGGCCTTTGATGTCATCTCTACCATCCCCTCTGAAGTTGCTCGGGCTTGTTTGCCCAAACGTCTTAGGACATACGGCTATTTTGGTATACTCCGCCTTTGGCGTATTCGTAGAGTCAGTGCCATGTTTGCAAGACTAGAGAAGGACAGAAGTTATAGCTACTTCTGGGTGCGGTGTTCAAAGCTTATATGTGTTAGTCTATTTGCGGTGCATTTTGGTGCCTGCTACTTCTATTTTCTTGCTGCACATCATCACCCATCAAAAACATGGCTTGGGCTGGTCAGTAATCTTGATGAACAAACGGGGTTAATGGCACGCTATGTAATAGCAGTTTACTGGGCTATCGTGACTCTTTCTACGGTTGGTTATGGTGACCTGCATCCTGTAAATTCGAGGGAGATGATATTCGACATTTTGTATATTCTCTTTTGTCTTGGACTTAATGCATATCTAATAGGAAACATGACCAGCTTGGTTGTTCAGGGGGCAAGTCGAACTAGGAAATACAGAGACACTGTCCAAGCTGCCGTAGGTTTTTCACAACGAAATCATCTGCCTTACCACTTGCAAGAACAGATGCTTGctcatttatatatgaagTACAGAATCGACTCAGAAGGACTGCAGCAAGAGCTTATTGATTCCCTTCCAAATGCCATTCGAGCTAGCATCTCACACTTTCTCTTCTATCCCTTGGTCGAAAAAGTGTATTTGTTTCATGGGGTGTCAGATGACTTACTTTTTCAACTGgTCACGGAGATGAAGGCTGAGTATTTTCCTCCAAAGGAAGACATAATTCTGCGGAATGAAGCCCCaacaaacttttatatattcgTCACTGGTGATGCAGATGTCATCATGCGACAGAGTGGAATAGAACAGGTTGTTGGTAGGGCAAGGACAGGAGATGTAGTTGGAGAAATTGGTGTGCTATGTTTCAGGCCACAGCTGTTTACAATCCGAACCAAACGGTTGTGCCAGCTTCTCCGCTTAGAGCGTGCTACATTTCTAAATCTTGTTAAGGCAAATATTGGGGACGGGACAATAATCATGAGCAATTTTCTTCAGCGTTTGCAAGATTTAAAGGATCCAATGATGGATCGAGTTCTGGCAGACACAGAGGCCATGCTGGCTCGAGGCAAAATGGAATTGCCTACCAGTTTATGCTTTGCTGCAACCAGAGGTAATGACCTGTTGTTGCATCATTTGTTGAGGAATGGTGCAGATCCAAATGAAGCGGACAAGAATGGAAGAACGGCCATGAATATTGCAGCATCCAAAGGCAGTGTGCAATGCATACATTTGCTTTTAGAATATGGTGCTAATCCCAACAGCAAAGATTTATGTGGAAATATCCCACTATGGGAAGCAATGATGGGAAGGCATAAATCTGTCGTGAAGGTTCTAAAGGACAATGGTGCAGACCTGTTTTCTGCTGATGTAGGCCAGTTCGCATGCACTGCTGTTGATCAAAATAACTTGGAATTGCTCAAGGAACTTATTGAGTATGGAGTGGATGTGTCGCAGCCCAAAAGCGATGGGATCACAGCGCTTCACACTGCAGTAAGTGAAGGAAACACTGAAATTGTCAGGTTCCTTGTAGAGCAAGGGGCAGACGTTGATAAGCCAGACAGTCATGGATGGACTCCAAGGGCTTTGTCAGATCAACAAGGCCAGGAAGAAATCATAGATATCTTCCGAAACATTCAACCAGGCAAAAACCAATCAGCTATTCCCGAGTCGAAGGATAGAATAAAGCTACACTTGGGCAGTTTTCATAGTGAGACTGCTCTGCCTTTGCCAACTACTCAATGGTCAGATCATGAGAAGCCAAAGGCTAACGATTTTCACAATTCTTTGTTTGGGTTCATGTCCTCTGCCACTTCTGGTAAGAGAGATCCCGGTGCATCTCCAAGCCAAGACGTAGTTTCCAGGAACATGTTTAGAGTAACACTTTGTTGTCCTGAGAAAGGTGAATCTGCTAGAAAGCTTATTTTTCtgccccataccttgcaagaGTTGCTAGATATTGGTGCAAAAAAGTTTGGCTTCTCTGCTaccaaaattttaaccaaAGAAGGAGCTGAAGTTGAAGACATGGCACTTGTAAGAGATAATGATCATCTTGTTCTTGCAAGTGATGTTGGTCATGAACATGGACAAGATGATGACTTACCAAGAAAGCAGGACTG 2621 0.4243 MKKMVGISIWGNKGDQELDKEQMSRDDGSYYSLTGIPLPALGANASKTRRPKLRPFIISPSNSRYRLWQTFLVLLVFYTAWVCPFEFGFIPEIPKSLTIADNVVNGFFAIDIVLTFFVAYLEKSSYLLIDNPKLIALRYAKTWLAFDVISTIPSEVARACLPKRLRTYGYFGILRLWRIRRVSAMFARLEKDRSYSYFWVRCSKLICVSLFAVHFGACYFYFLAAHHHPSKTWLGLVSNLDEQTGLMARYVIAVYWAIVTLSTVGYGDLHPVNSREMIFDILYILFCLGLNAYLIGNMTSLVVQGASRTRKYRDTVQAAVGFSQRNHLPYHLQEQMLAHLYMKYRIDSEGLQQELIDSLPNAIRASISHFLFYPLVEKVYLFHGVSDDLLFQLVTEMKAEYFPPKEDIILRNEAPTNFYIFVTGDADVIMRQSGIEQVVGRARTGDVVGEIGVLCFRPQLFTIRTKRLCQLLRLERATFLNLVKANIGDGTIIMSNFLQRLQDLKDPMMDRVLADTEAMLARGKMELPTSLCFAATRGNDLLLHHLLRNGADPNEADKNGRTAMNIAASKGSVQCIHLLLEYGANPNSKDLCGNIPLWEAMMGRHKSVVKVLKDNGADLFSADVGQFACTAVDQNNLELLKELIEYGVDVSQPKSDGITALHTAVSEGNTEIVRFLVEQGADVDKPDSHGWTPRALSDQQGQEEIIDIFRNIQPGKNQSAIPESKDRIKLHLGSFHSETALPLPTTQWSDHEKPKANDFHNSLFGFMSSATSGKRDPGASPSQDVVSRNMFRVTLCCPEKGESARKLIFLPHTLQELLDIGAKKFGFSATKILTKEGAEVEDMALVRDNDHLVLASDVGHEHGQDDDLPRKQD 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02421 873 ProSiteProfiles Ankyrin repeat profile. 526 558 IPR002110 GO:0005515
Bva06g02421 873 Pfam Cyclic nucleotide-binding domain 401 485 IPR000595 -
Bva06g02421 873 Gene3D - 67 304 - -
Bva06g02421 873 SUPERFAMILY cAMP-binding domain-like 307 502 IPR018490 -
Bva06g02421 873 PANTHER POTASSIUM CHANNEL AKT1-LIKE ISOFORM X1 5 867 - -
Bva06g02421 873 PANTHER POTASSIUM CHANNEL AKT1 5 867 IPR045319 GO:0005249|GO:0006813
Bva06g02421 873 SUPERFAMILY Ankyrin repeat 529 711 IPR036770 -
Bva06g02421 873 ProSiteProfiles cAMP/cGMP binding motif profile. 381 500 IPR000595 -
Bva06g02421 873 Gene3D Jelly Rolls 352 516 IPR014710 -
Bva06g02421 873 SUPERFAMILY Voltage-gated potassium channels 60 303 - -
Bva06g02421 873 Coils Coil 871 873 - -
Bva06g02421 873 Pfam Ion transport protein 66 308 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bva06g02421 873 SMART cnmp_10 381 498 IPR000595 -
Bva06g02421 873 ProSiteProfiles Ankyrin repeat profile. 559 591 IPR002110 GO:0005515
Bva06g02421 873 ProSiteProfiles Ankyrin repeat region circular profile. 559 590 - -
Bva06g02421 873 CDD CAP_ED 381 486 IPR000595 -
Bva06g02421 873 Pfam Ankyrin repeats (3 copies) 631 709 IPR002110 GO:0005515
Bva06g02421 873 Pfam Ankyrin repeats (3 copies) 531 619 IPR002110 GO:0005515
Bva06g02421 873 Gene3D - 528 711 IPR036770 -
Bva06g02421 873 ProSiteProfiles KHA domain profile. 792 872 IPR021789 -
Bva06g02421 873 ProSiteProfiles Ankyrin repeat profile. 656 688 IPR002110 GO:0005515
Bva06g02421 873 ProSiteProfiles Ankyrin repeat region circular profile. 656 687 - -
Bva06g02421 873 PRINTS EAG/ELK/ERG potassium channel family signature 78 85 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva06g02421 873 PRINTS EAG/ELK/ERG potassium channel family signature 250 267 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva06g02421 873 PRINTS EAG/ELK/ERG potassium channel family signature 101 111 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva06g02421 873 PRINTS EAG/ELK/ERG potassium channel family signature 112 121 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva06g02421 873 PRINTS EAG/ELK/ERG potassium channel family signature 294 303 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva06g02421 873 Pfam KHA, dimerisation domain of potassium ion channel 792 854 IPR021789 -
Bva06g02421 873 SMART ANK_2a 559 588 IPR002110 GO:0005515
Bva06g02421 873 SMART ANK_2a 623 652 IPR002110 GO:0005515
Bva06g02421 873 SMART ANK_2a 592 621 IPR002110 GO:0005515
Bva06g02421 873 SMART ANK_2a 526 555 IPR002110 GO:0005515
Bva06g02421 873 SMART ANK_2a 656 685 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02421 Bva-Chr6 15517700 15523234 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02421 21 857 Ion Channels AT2G25600 57.728 0.0 989
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02421 K21867 - gmx:100786870 1105.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00346 10 4093010 4097155 Bva06g02421 06 15517700 15523234 BWGD
Bva06g02421 06 15517700 15523234 Bva06g02421 06 15517700 15523234 ECH