Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02413 ATGGATTCTCCTGAAACTTCCAAAAACAACGTTACCACTACTGCGTCCACAACCACCGCCGCTACCTCTTCATCGGAATCCCCTCCAGTTCAAGAATCTCCCTTTTTCCGTTTTGTAAACAATTTATCTCCAATAAAGTCTGCCAAGGCTTCTCATCTTGCACAAGGTTTCCTTGGACTCAGTTCTCCGCCTCTTGTATTCACATCACCTCGTATAAATTCTCAGTCTGAAGCACAGTTCTTGAAAAGGCCTCAATTCTCTCAATCACACTGTGTAGAAACTTCTCAAGGAAACAACAAAAGCGAGAGTTTCATTGATGATCCCGACATTTCCAATAAATCAGCCTCTCTACTGCCGGGAAATGTTATAACTGACACTCAGAAGGATCTTGTAATCAAGAATGATGAGAACACGCAACACTGCAGTTCTTCACCACGTGTTGATGAATATTTAGTTGATCCTGTTGATGTTGATTGTATGTATACAACGCATTCGGTCAACCCAGATGTGAAACAATTTAATGATGCAGTTGAATCATCCCAAGAGGAATCTAAAGATGTTGATGAACCAGAAAACATAGAAGATGAGATAACAGATGTTGGAGGGCTTTCTAAAGAATGTGCAAAATCAGAGAGACAACAGTGCCGTAACTCATTTTCCCAGGATCTTCAAGAATATGAAGACTGTGGCGAGATGGGACCAAACTCATCTATATGTGCAGAGAACATGAAGCAAGATGGTTCTGAGCTAATGCAGGCCTGTCTAAAGCCCCGTGGCATGCGTCGACGTTGCCTTCAATTTGAGGAGGCTGCATCAAATGCTTTCGGCAATATTAAAAGCTCCTCGCTTCCTTTGAACACTCCAGAAGAATCAAGAACATCATCTCGCTCCTCAGAATTGAGAGATTTAATAGCATATGGTTCCAAGCCATCAGGTATTGGATTGCATTTAAATAGCATTGTAAATGCTATGCCACTAGCAGAGGGTTGTATGCAGAAGATGAAGTCAGTATCTTCAGTAAGCTGGCAGAAAGTGGAGAACATGAATAAATgcttaatttcatcaaatatgGATGGGCAATCTTCAGTTGGCGCTGAAGATGAGAGGCGTGAGATTACTGCCACCTCGGAGTCTCCTAGTACCATGGATCCTTCAAATTATTTGGACCATGTTGAGCATCCCGCAGATGTTCATTATAAGAGGAAACTAAATCCTAAAGAAGCTGGGAATTTTGAGGAAATGAGCCAATCAAGtcccaaaaggaaaaaGAAGAAAATATCAGCCACTGGCGAAGATGATGGTTGCAAACGGTGCAACTGTAAGAAGAGTAAATGTTTAAAACTTTATTGTGATTGTTTTGCTGCCGGAATCTATTGTGCTGAAACTTGTTCTTGCCAAGGCTGCTATAATAGACCAGAATATGAAGATACAGTTTTTGAGACGAGGCAACAAATTGAATCCCGTAATCCACTTGCTTTTGCTCCGAAGATTGTACAGCGTGCCACTGATTTTCCATTAAATGAAATGGAAGATGTTCATCTAACGACACCATCATCAGCAAGGCACAAAAGAGGTTGCAATTGCAAAAGGTCTCTGTGTCtgaaaaaatattgtgaatGTTATCAGGCTAATGTTGGATGCTCAAGTGCATGTCGATGCGAAGGGTGTAAGAATGCCTATGGCAAGAAAGAAGACTATATCGCGATAGAACATGCTTTCAGTAAAGAAAGGTTGAGCGGCAGAGTTGAAAAAGTATCAGATGGTACGTTTCACAATGAGCTCGAAATGGTGGCAAACAATACGGATTTATTACGTGGAGACTTGTTTGATTTGCACCAGCTTTCCCCTCTAACACCATCATTGCAATGCTCAGATCAAGGAAAGGAAGCTGCAAAATCTCGAGTTCTTACTGGAAATTATCATCCTTCATCTGGATCTGATGTCACCGTGTTTACCCCTCACGCAAAATTCGCTGAGTGTCCGGAAAACCCAGAGCGCAGTCTTGTGCTTCAGGAAACAAATGAGATGGTAGGAACTGACTCCGGTCATTGGCAACTAGATAGTGATAACGTAGAAATAATGGATCAATCATCACCGAGATGTACTTCAGTCAGCAATGCGGGCCGGTTTGCTTCTATGTCTAATGCTCCTTCAAGGACTATGGATGCATCAATCCCGTCTAAAACAAGGGAATGGACGCATCATCCACAAGCCCAACAGTCCCATGGAAGTAGTAACATCTTATCTGGTGGTTCTCTTCGTTGGCGTAGTTCACCGATTACACCAATGACAAGATTAGGTGAGATTAAAAATCTAGAGTGCAATGAATCGGAGAGCAGACTTTTTGACATTCTAGAAGATGAAACACCTGAGGTATTAAAGGAAGCTTCAACTCCCAGGGAGTCTGTGAAAGCTAGTTCCCCAAATCAGAAGCGAGTTTCTCCTCCTAAGAGTCTTGCACGTGAGCTTGGGTCAAGCTCTTCAGTAGGCCTGAGAAGTGGCAGGAAATTCATATTGAAGGCTGTGCCTTCTTTCCCACCATTGACACCTTGCATTGATTCCAAAGGCCCCAGTCATGAGAATTCGGGTGCCAGTAATAGCAAGTACAGTAAACAGGCCCCCAGATG 2627 0.4203 MDSPETSKNNVTTTASTTTAATSSSESPPVQESPFFRFVNNLSPIKSAKASHLAQGFLGLSSPPLVFTSPRINSQSEAQFLKRPQFSQSHCVETSQGNNKSESFIDDPDISNKSASLLPGNVITDTQKDLVIKNDENTQHCSSSPRVDEYLVDPVDVDCMYTTHSVNPDVKQFNDAVESSQEESKDVDEPENIEDEITDVGGLSKECAKSERQQCRNSFSQDLQEYEDCGEMGPNSSICAENMKQDGSELMQACLKPRGMRRRCLQFEEAASNAFGNIKSSSLPLNTPEESRTSSRSSELRDLIAYGSKPSGIGLHLNSIVNAMPLAEGCMQKMKSVSSVSWQKVENMNKCLISSNMDGQSSVGAEDERREITATSESPSTMDPSNYLDHVEHPADVHYKRKLNPKEAGNFEEMSQSSPKRKKKKISATGEDDGCKRCNCKKSKCLKLYCDCFAAGIYCAETCSCQGCYNRPEYEDTVFETRQQIESRNPLAFAPKIVQRATDFPLNEMEDVHLTTPSSARHKRGCNCKRSLCLKKYCECYQANVGCSSACRCEGCKNAYGKKEDYIAIEHAFSKERLSGRVEKVSDGTFHNELEMVANNTDLLRGDLFDLHQLSPLTPSLQCSDQGKEAAKSRVLTGNYHPSSGSDVTVFTPHAKFAECPENPERSLVLQETNEMVGTDSGHWQLDSDNVEIMDQSSPRCTSVSNAGRFASMSNAPSRTMDASIPSKTREWTHHPQAQQSHGSSNILSGGSLRWRSSPITPMTRLGEIKNLECNESESRLFDILEDETPEVLKEASTPRESVKASSPNQKRVSPPKSLARELGSSSSVGLRSGRKFILKAVPSFPPLTPCIDSKGPSHENSGASNSKYSKQAPR 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02413 875 MobiDBLite consensus disorder prediction 356 386 - -
Bva06g02413 875 MobiDBLite consensus disorder prediction 855 875 - -
Bva06g02413 875 MobiDBLite consensus disorder prediction 800 831 - -
Bva06g02413 875 MobiDBLite consensus disorder prediction 844 875 - -
Bva06g02413 875 MobiDBLite consensus disorder prediction 416 433 - -
Bva06g02413 875 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 4 1 860 - -
Bva06g02413 875 MobiDBLite consensus disorder prediction 408 433 - -
Bva06g02413 875 ProSiteProfiles CRC domain profile. 434 561 IPR005172 -
Bva06g02413 875 MobiDBLite consensus disorder prediction 89 112 - -
Bva06g02413 875 SMART CXC_2 433 474 IPR033467 -
Bva06g02413 875 SMART CXC_2 521 562 IPR033467 -
Bva06g02413 875 MobiDBLite consensus disorder prediction 695 759 - -
Bva06g02413 875 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 436 471 IPR005172 -
Bva06g02413 875 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 524 559 IPR005172 -
Bva06g02413 875 MobiDBLite consensus disorder prediction 1 32 - -
Bva06g02413 875 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 860 IPR044522 GO:0003700
Bva06g02413 875 MobiDBLite consensus disorder prediction 790 831 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02413 Bva-Chr6 15478748 15483810 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02413 787 850 CPP Transcription Factor Family AT4G14770 46.154 4.99e-07 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Bva06g02413 TCR 7.2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02413 K21776 - gmx:547664 752.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02413 06 15478748 15483810 Bva06g02413 06 15478748 15483810 ECH