Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02403 ATGtttctgcttttctttctctattccttGTTTGGTAAAACTTATTCAAGCTCTGTGTTTCACCCCAATACCTTGtattttccttcctttggCCCTGAAAGTTGCAGCAATGGTCAATTACTCTGTATGGGCTCTGTGACTGCAGGCACTGGGTTTTTAAGTCTCACGCCAGAGCCACAACAAGGCAATTTAACTTTACCATCGTCTTCTGCATTGAACAAGATAGGAAGGGTTCTGTATCCTCAACCTGTGCATGCTTGGCCAGCAATTATCTCTACCACCTTCACTCTGAGGATCACTCCCTTTCCAAATTCCACCAAATCAGGTGATGGAATGGCTTTTGTTTTTGCACAAGATGATAGACCCTCACCAAATGCTAGCCATGGCTCATATCTTGGCCTTTTTGATAGATCTACACAAgGTGGGGGTTATCGACAAATAGCTGTGGAGCTGGACACTTTCATGAATGAGTTTGATATAGATGCAAACCACGTAGGCATTGATACAACGAGCATCATAAATCCAGTTGCTGCAGTGAGTCTCAATAGCACTGGTGTTGATCTGAAAAGTGGAAGAGACATTGAtgtgaaaatagaatataatggTTGGACTAACATGCTCCATGTCTCCGTGGGATACTCTGGAAACCAGTTGAATAATGTTCTTAACCATTCGATTGTCCTATCTGATATAATTCCCAGTTCTGTTTATGTTGGGTTCACAGCCTCCACTGGCAAAACTTCACCAGAAAGCCATCAGATCCTCAAATGGGTATTCACATCAGTGCCACTTCCCTTACAAACTGATGAACACACTAAACATGATACCATCAATACCATACTGATAATTGTGATACCAATTTTTCTAGTGGCGTTATTTAGCTCAATTCCCTTTATTTGGGAAGCTTTCAGAAAAGATAATTTCaggagaaaaaaggaagaagatataGAAAACCTATCAAGGAGAGCAGCAGATTCCCCCAAGAAGTTCACTTACAAGCAACTGTCTAAGGCGACATGCAACTTCAGCACAGAAAATCTTCTGGGCTCAGGTGGATTTGGTAGTGTCTATAGAGGCATCATATCAGATATTACTCCAAAAACCGTAGCAGTAAAGAAGATTTCAGCAACCTCTAAGCAAGGTGAAAGAGAGTTCTTTGCTGAAATATGTACCATAGGGCGGCTCAGGCACAAAAACTTAGTGAAGCTGCAAGGGTGGTGCCATGATGGTGTTCAACTTCTCTTAGTCTATGATTACTTGCAAAATGGAAGCCTTGATCGATTCATAGGCAAGGACATTCTAGACTGGCAAACCAGGCAACAGATATTAACAGGTTTGGCCTCGGCATTGCTTTACCTTCACGAAGAGTGTGGCAACCCAGTTGTCCATAGAGACGTAAAGCCTAGTAACGTAATGTTAGATATTGGTTTCAAAGCTCATCTAGGCGACTTTGGCCTCGCAAGATTGCACAAAGAAGATTCAATGACTTCAGTTATAGCTGGTACTCCAGGATATATGGCCCCCGAAGTAGGCTTTACAGGGAAAGTGACCCCTGAATcagatgtttatagttttggtaTGGTGATTCTTGAAGTCATATGTGGGAGAAGGTCAAAAGGGATGATGGAAGAGAACAGTTTGGTTGACTATGTATGGGATTTGCATTCTAAGAATGCGTTGCTCCAGTGTGTTGacaaatatcttaataatcGATTTGATTTTGACGAGGAAGAAGTGAAAAGGGCATTGAAGACTGGGCTGGCATGTTTGCATCCGGATCCCACGTTGAGGCCTAAGATGAGTAAAGTTGTGAACATATTTCAGAACCCAAACGAGCCTCTAATGGAATTACCCGTTAATAGGCCCACTGGATTGTACGAATCATTATCTGTGACTTCCTCTGCATCAACTACTGATTTTGGGTCCAAAGGAATACATGCCTTGCTCCAATCATCTACGGAATCATTAGAAGAAATTTCTATCTCATATCATCAGCCCTG 2000 0.4 MFLLFFLYSLFGKTYSSSVFHPNTLYFPSFGPESCSNGQLLCMGSVTAGTGFLSLTPEPQQGNLTLPSSSALNKIGRVLYPQPVHAWPAIISTTFTLRITPFPNSTKSGDGMAFVFAQDDRPSPNASHGSYLGLFDRSTQGGGYRQIAVELDTFMNEFDIDANHVGIDTTSIINPVAAVSLNSTGVDLKSGRDIDVKIEYNGWTNMLHVSVGYSGNQLNNVLNHSIVLSDIIPSSVYVGFTASTGKTSPESHQILKWVFTSVPLPLQTDEHTKHDTINTILIIVIPIFLVALFSSIPFIWEAFRKDNFRRKKEEDIENLSRRAADSPKKFTYKQLSKATCNFSTENLLGSGGFGSVYRGIISDITPKTVAVKKISATSKQGEREFFAEICTIGRLRHKNLVKLQGWCHDGVQLLLVYDYLQNGSLDRFIGKDILDWQTRQQILTGLASALLYLHEECGNPVVHRDVKPSNVMLDIGFKAHLGDFGLARLHKEDSMTSVIAGTPGYMAPEVGFTGKVTPESDVYSFGMVILEVICGRRSKGMMEENSLVDYVWDLHSKNALLQCVDKYLNNRFDFDEEEVKRALKTGLACLHPDPTLRPKMSKVVNIFQNPNEPLMELPVNRPTGLYESLSVTSSASTTDFGSKGIHALLQSSTESLEEISISYHQP 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02403 666 Pfam Protein kinase domain 343 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02403 666 ProSiteProfiles Protein kinase domain profile. 342 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02403 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Bva06g02403 666 SUPERFAMILY Protein kinase-like (PK-like) 325 606 IPR011009 -
Bva06g02403 666 Gene3D Transferase(Phosphotransferase) domain 1 420 616 - -
Bva06g02403 666 Gene3D Phosphorylase Kinase; domain 1 303 419 - -
Bva06g02403 666 PANTHER - 69 634 - -
Bva06g02403 666 Pfam Legume lectin domain 27 265 IPR001220 GO:0030246
Bva06g02403 666 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 266 IPR013320 -
Bva06g02403 666 ProSitePatterns Protein kinases ATP-binding region signature. 348 373 IPR017441 GO:0005524
Bva06g02403 666 Gene3D - 26 283 - -
Bva06g02403 666 SMART serkin_6 342 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02403 666 ProSitePatterns Legume lectins beta-chain signature. 147 153 IPR019825 -
Bva06g02403 666 CDD STKc_IRAK 348 604 - -
Bva06g02403 666 CDD lectin_legume_LecRK_Arcelin_ConA 27 261 IPR001220 GO:0030246
Bva06g02403 666 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IX.1-LIKE 69 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02403 Bva-Chr6 15437682 15439897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02403 74 626 Receptor kinase-like Gene Family AT5G10530 39.759 6.99e-111 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Bva06g02403 Pkinase 4.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02403 - - gmx:102665030 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02403 06 15437682 15439897 Bva06g02403 06 15437682 15439897 ECH