Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02397 ATGATGATTTCTATCAGCCATAACTTTCCAGGTGCTTCAATCAAGAAAGGTGGTCCTAGGGAACCCTGGCATGATATTCACTGGCAACTAAAATGGGCCAGTGGCCAGGATGTCTTGTACAATTTTGAGCAGAGGTGGAAATCAAGACCTATTTACACTTAGATAACCTGGTGTGGCTTTTCTGCTTACCATTATGTCCTTGGAATCTTAGGAAGTGGTGATAAGAGCAGAGGCTGTATTGCATGCTGCAAAAAACCTCCCTTAAATATTTCATCGGATAAGCCATCTACAAGAAGGAGGACTAAGGGTCAAGCAGCgaaaaaagaagcagaatATCTCTGGAGCAGTGGCACTTTTGAAATGGATCAAAGTACAATTCAGTCCCGGAGAAGCATCTCATCAATTTGTATATCAAACCCTCAGAGTACTACTGGCAGTGAGATTAATCCTTCAGAATTTGTCAATCATGGTCTTATTCTCTGGAACCAGAGAAGGCAGGAATGGATTGGAAACAGAAAGTCGCAAACTCGGAGTCGGACACAAGTTGTTGAACCCAGAATAagTTGGAATGCTACGTACGAGAGTCTACTTGGGAATAACAAGCCTTTCGCCCACCGTATCCCCATGGGAGAAATGATTGACTTTCTTGTTGATATTTGGGAGCAAGAGGGTCTGTACGATTGGTG 686 0.4227 MMISISHNFPGASIKKGGPREPWHDIHWQLKWASGQDVLYNFEQRWKSRPIYTITWCGFSAYHYVLGILGSGDKSRGCIACCKKPPLNISSDKPSTRRRTKGQAAKKEAEYLWSSGTFEMDQSTIQSRRSISSICISNPQSTTGSEINPSEFVNHGLILWNQRRQEWIGNRKSQTRSRTQVVEPRISWNATYESLLGNNKPFAHRIPMGEMIDFLVDIWEQEGLYDW 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02397 227 PANTHER OS07G0479600 PROTEIN 74 226 - -
Bva06g02397 227 Pfam Protein of unknown function (DUF4050) 185 226 IPR025124 -
Bva06g02397 227 Pfam Protein of unknown function (DUF4050) 118 179 IPR025124 -
Bva06g02397 227 PANTHER DUF4050 FAMILY PROTEIN 74 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02397 Bva-Chr6 15414782 15418287 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02397 8 46 Phospholipase D Gene Family (Wang group) AT5G25370 76.923 5.17e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02397 - - twl:120006661 182.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02397 06 15414782 15418287 Bva06g02397 06 15414782 15418287 ECH
Bva10g00375 10 4225253 4229084 Bva06g02397 06 15414782 15418287 ECH
Bva06g00981 06 8204508 8207505 Bva06g02397 06 15414782 15418287 ECH
Bva05g00707 05 3492596 3495663 Bva06g02397 06 15414782 15418287 ECH