Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02394 ATGACTTCAACTTTCTCCAGCCATTCTCTGCTTTGCTCAACCGCCTGCTCTTCCTCCTCTTATCCCTCTACCGAATTCAAATTTCCCGCCAAACCGATAAGGTCATCTTCGTCAACGGTCCAATTTTCCTCAGACAAGATCGACGAGCATGTCTCCGGAATCACAGATCCTGGCATATCGTTCTCGACTAGCAGAAGGAGAGCGCTTATATCTATAGCCATACTACCATGTCTTGTTCCCTTAAGTCCAAACATAGGTGGTCTTGGAGCAAACGCCATGGAGTCAGGTACAAAGGATCATCTCCTCATAAAAGAAGAGGTGAGGAAAGTGTTATCAAAAGGAAAGGCGGCAGGTGTGCTTCGTTTGGTTTTCCATGATGCAGGAACCTTTGAAATGAGTGACAATACAGGTGGTATGAATGGTTCCATAGTCTTTGAACTTGAAAGACAGGAAAACGCTGGCCTAAACAAATCTATTAAGGTTCTagagaaagcaaagaaggAGATAGATACTACACAGCCAGtaTCCTGGGCAGACTTGATTGCTGTGGCTGGAGCTGAAGCAGTTGCAGTATGTGGAGGTCCAAAAATTCCGGTTTCATTGGGTAGAGTAGATTCAATGGTGCCTGATCTTGAGGGAAAACTTCCTCGAGAATCCCTTAATGCTTCTGGTTTGAAGAAATGCTTCCAAAGAAAAGGCTTTTCAACTCAAGAACTTGTTGCTTTGTCTGGAGCCCACACTATTGGAAGCAAAGGCTTCGGAAGCCCAACTTCTTTTGACAATGCATATTATAAAGTTCTCTTGGAGAAGCCATGGATGTCAGGTAGTAGTATGTCAAGAATGATTGGACTCCCTTCAGATCACGCACTTGTTGAGGACGATGAATGCTTAAGatggattaaaaaatatgcGGACAATGAGAATATGTTCTTTGAAGATTTCAAGAATGCTTACATGAAGCTGGTGAATTCTGGTGCAAGATGGAGAAGCTTATA 995 0.4211 MTSTFSSHSLLCSTACSSSSYPSTEFKFPAKPIRSSSSTVQFSSDKIDEHVSGITDPGISFSTSRRRALISIAILPCLVPLSPNIGGLGANAMESGTKDHLLIKEEVRKVLSKGKAAGVLRLVFHDAGTFEMSDNTGGMNGSIVFELERQENAGLNKSIKVLEKAKKEIDTTQPVSWADLIAVAGAEAVAVCGGPKIPVSLGRVDSMVPDLEGKLPRESLNASGLKKCFQRKGFSTQELVALSGAHTIGSKGFGSPTSFDNAYYKVLLEKPWMSGSSMSRMIGLPSDHALVEDDECLRWIKKYADNENMFFEDFKNAYMKLVNSGARWRSL 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02394 331 PRINTS Plant ascorbate peroxidase signature 193 205 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bva06g02394 331 PRINTS Plant ascorbate peroxidase signature 134 144 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bva06g02394 331 PRINTS Plant ascorbate peroxidase signature 116 131 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bva06g02394 331 PRINTS Plant ascorbate peroxidase signature 214 231 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bva06g02394 331 PRINTS Plant ascorbate peroxidase signature 232 253 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bva06g02394 331 PRINTS Plant ascorbate peroxidase signature 302 326 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bva06g02394 331 PRINTS Plant ascorbate peroxidase signature 174 192 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bva06g02394 331 ProSitePatterns Peroxidases active site signature. 116 127 IPR019794 GO:0004601
Bva06g02394 331 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 3 329 IPR044831 GO:0004601|GO:0034599
Bva06g02394 331 ProSiteProfiles Plant heme peroxidase family profile. 116 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva06g02394 331 Gene3D - 104 325 - -
Bva06g02394 331 PANTHER L-ASCORBATE PEROXIDASE 6-RELATED 3 329 - -
Bva06g02394 331 SUPERFAMILY Heme-dependent peroxidases 113 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bva06g02394 331 ProSitePatterns Peroxidases proximal heme-ligand signature. 238 248 IPR019793 -
Bva06g02394 331 Pfam Peroxidase 105 306 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva06g02394 331 Gene3D Peroxidase, domain 2 216 318 - -
Bva06g02394 331 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva06g02394 331 PRINTS Haem peroxidase superfamily signature 116 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva06g02394 331 PRINTS Haem peroxidase superfamily signature 175 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva06g02394 331 PRINTS Haem peroxidase superfamily signature 193 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02394 Bva-Chr6 15397950 15401309 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02394 67 327 Peroxidase AT5G47000 28.571 1.58e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02394 K00434 - gmx:100792735 428.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02394 06 15397950 15401309 Bva06g02394 06 15397950 15401309 ECH