Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02393 ATGGAGAAACGTTGGCCTTTCTTCCATATGATTTGCTTCCTGggattttctgttatttttttgtccGAAATCTGTTTGGCTGGTGTTCAAAGTATTGGCAATATCACTTCAGGTTTTCAAGGTTCTCAAATGAATTGGATTGACAAAGAAAATGGGTTGTTTCTTCTGTCAAAAAGTCAAGAATTTGCCTTGGGCTTCAAGACTACAGGGGACAAaactttgtttcaactagtaATCATCCACAGAGAAAGTAACACAGTGGTTTGGACTGCAAATAGAGCACAAGCTGTCAGTAACTCTGATAAATTTGTGTTTGATGAAAAGGGCAATGCCTTTTTAAGGAAAGGGGAAACCGTTGTTTGGTCTACCAACACAGCCAACAAAGGAGTTTCTTCCATGGAATTGCAGGACACAGGGAACTTGGTTCTGCTCACAAATGATACCAGAATAGTTTGGCAGAGTTTCAGCCATCCAACAGATACCCTTTTACCAGAGCAGGAGTTCACAGAGGGAATGAAACTCATCAGTGAACCTAGCTCCAATAACAATTTGACCTATTTTCTTGAGATGAAATCTGGTGATATTATCCTTTCTGCTGGTTTCCAAACGCCACAGCCTTATTGGTCTATCCAGAAGGAAGACCgcaaaatcatcaacaaagaTGGTGATGTGGTTTCTTCAGCATCTTTAAGTGGAAATTCATGGAGGTTCTACGATCGAAACAAAGCCTTGTTATGGCAATTCATTTTTGCCGAAGATTCAGATATAAATGCCACTTGGATTGCAGTTCTGGGTAGTAATGGCTTTATCACTTTCTACAATCTCAAAAGTGGATCGTCAAGTGGTGcttcaacaacaaaaatacCACAAGATTTTTGCAGCAGACCTGAACCTTGTGATTCATATAACATATGCAGTGGTGACAACAATTGCAGATGCCCTTCGGTTCTCAGCTCGCATAAAAATTGCAGACCAGGTATTGTTTCTCCTTGTAATGAATCAGACCTCCCCATAGAGCTTGTAGAAGCTGATGATATCTCCAGCTACTTTGCACTTGGATTCCTCCAACCCTCTTCAAAAACCGATTTAAGAGGTTGTAAAGCTTCTTGCCTTGGAAATTGCTCTTGCCTTGCTATGTTTTTCCACAACAGTTCAGGAAACTGTTTCCTGTTGGACAAAATAGGAAGTTTCCAGCAATCTGATACAGATACTGGTTTTGTGGCTTACATTAAGGTCTCTAGTGCTGGAGGCACAGGCAATGGGGACAGTGGAAACGGCCATAAACATACCGTAGTCATTGTGATGATTGTCGTTTCAACGTTGTTTGTCATTTCTTGTCTGCTGTATTTGGGACTTAGATATTACAGGAAGAATCAAAAATGGCCAGAGTCTCCTCGAGAGAGTTCAGAAGAGGACAATTTCTGGGAGAATTTAACTGGAATGCCAGTCCGTTTCAGCTACAAAGAATTGGAAACTGCAACCAACAACTTCACGGTGAAGCTTGGGCATGGGGGTTTTGGCTCAGTTTACAAAGGAGTTCTACCAGATGGGACTCAGCTAGCTGTGAAGAAGTTGGAAGGCATTGGCCAAGGGAAAAAAGAGTTCAGAGCTGAAGTTAGCATCATTGGCAGCATTCACCACCTTCATTTGGTCAAGCTTAAAGGTTTCTGTGCAGAAGGAGCCCATCGGCTTCTTGCGTATGAGTTTATGACAAATGGGTCATTGGATCAATGGATATTCAAGAAGAAAGAGGGAGAGTTCCTGTTGGATTGGGACACAAGGTTCAACATAGCTCTGGGAACAGCAAAAGGATTGGCTTACCTGCACGAAGACTGTGATTCAAAGATCGTTCATTGTGACATCAAACCAGAAAATGTACTCCTCGATGATCATTTCCATGCCAAAGTTTCAGACTTTGGATTAGTTAAACTTATGAATCGCGAACAAAGTCATGTTTTTACAACACTTAGAGGCACCAGAGGGTATCTTGCACCAGAGTGGATTACAAACTATGCCATATCAGAGAAAAGTGATGTTTATAGTTATGGAATGTTATTGTTAGAGATTATCGGAGGAAGAAAAAACTATGATCCAACTCAATCTTCAGAGAAATCCCATTTTCCATCTTATGCTTTTAAGATGATGGATGAAGGGAAGCTAAAGGATATTCTCGATTCAAAGCTGATGATAGATGAACATGAGCAGAGGGTTCAAACTGCTGTTAAGGTTGCATTGTGGTGCATACAGGAAGACATGTCTCTGAGGCCTTCCATGTCCAAGGTTGTCCAAATGCTTGAGGGTCTCTGCACTGTTCCTAAGCCGCCAACTGGTTCTCCATTGGGTTCTCGCCTTTACTCAACTTTATTCAAATCCACGAGCGATGGGGGCACTTCTTTAGGGCCATCAGACTGTAACAGTGATGCTTATCTCTCTGCAGTTCGTCTTTCAGGACCAAGATA 2459 0.4071 MEKRWPFFHMICFLGFSVIFLSEICLAGVQSIGNITSGFQGSQMNWIDKENGLFLLSKSQEFALGFKTTGDKTLFQLVIIHRESNTVVWTANRAQAVSNSDKFVFDEKGNAFLRKGETVVWSTNTANKGVSSMELQDTGNLVLLTNDTRIVWQSFSHPTDTLLPEQEFTEGMKLISEPSSNNNLTYFLEMKSGDIILSAGFQTPQPYWSIQKEDRKIINKDGDVVSSASLSGNSWRFYDRNKALLWQFIFAEDSDINATWIAVLGSNGFITFYNLKSGSSSGASTTKIPQDFCSRPEPCDSYNICSGDNNCRCPSVLSSHKNCRPGIVSPCNESDLPIELVEADDISSYFALGFLQPSSKTDLRGCKASCLGNCSCLAMFFHNSSGNCFLLDKIGSFQQSDTDTGFVAYIKVSSAGGTGNGDSGNGHKHTVVIVMIVVSTLFVISCLLYLGLRYYRKNQKWPESPRESSEEDNFWENLTGMPVRFSYKELETATNNFTVKLGHGGFGSVYKGVLPDGTQLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLKGFCAEGAHRLLAYEFMTNGSLDQWIFKKKEGEFLLDWDTRFNIALGTAKGLAYLHEDCDSKIVHCDIKPENVLLDDHFHAKVSDFGLVKLMNREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMLLLEIIGGRKNYDPTQSSEKSHFPSYAFKMMDEGKLKDILDSKLMIDEHEQRVQTAVKVALWCIQEDMSLRPSMSKVVQMLEGLCTVPKPPTGSPLGSRLYSTLFKSTSDGGTSLGPSDCNSDAYLSAVRLSGPR 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02393 819 PIRSF SRK 5 813 IPR024171 GO:0004674
Bva06g02393 819 Pfam Protein kinase domain 499 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02393 819 CDD STKc_IRAK 501 768 - -
Bva06g02393 819 Gene3D Transferase(Phosphotransferase) domain 1 570 773 - -
Bva06g02393 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 87 182 IPR036426 -
Bva06g02393 819 ProSitePatterns Protein kinases ATP-binding region signature. 501 524 IPR017441 GO:0005524
Bva06g02393 819 SMART serkin_6 495 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02393 819 SMART blect_4 44 158 IPR001480 -
Bva06g02393 819 ProSiteProfiles PAN/Apple domain profile. 331 414 IPR003609 -
Bva06g02393 819 ProSiteProfiles Bulb-type lectin domain profile. 40 156 IPR001480 -
Bva06g02393 819 ProSiteProfiles Protein kinase domain profile. 495 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02393 819 Gene3D Phosphorylase Kinase; domain 1 459 569 - -
Bva06g02393 819 Gene3D - 48 157 IPR036426 -
Bva06g02393 819 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 819 - -
Bva06g02393 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Bva06g02393 819 SUPERFAMILY Protein kinase-like (PK-like) 475 766 IPR011009 -
Bva06g02393 819 CDD B_lectin 51 158 IPR001480 -
Bva06g02393 819 Pfam D-mannose binding lectin 86 169 IPR001480 -
Bva06g02393 819 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 1 819 - -
Bva06g02393 819 CDD PAN_AP_plant 358 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02393 Bva-Chr6 15394056 15397306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02393 438 775 Receptor kinase-like Gene Family AT5G20050 43.417 7.78e-95 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bva06g02393 Pkinase 2.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02393 - - gmx:100791158 1209.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00378 10 4245985 4249567 Bva06g02393 06 15394056 15397306 BWGD
Bva06g02393 06 15394056 15397306 Bva06g02393 06 15394056 15397306 ECH