Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02369 ATGGGGAAGCCCACTGGGAAGAAGAAGGATGTTGTTGCCCAGAAGGCTGCGAATGCGAACAGCAAGCCTATCAAGCCTTCCGAGAGGACCTCCAAGGCTTTTGATGAAGACACAGCGATGTTCATCAACATGTCACAAGACCTCAAGGAAGAAGGCAACAGACTATTTCAGAAGAAGGATTATGAAGGCGCTATGTTGAAGTATGAGAAGGCCCTCAAGCTCCTTCCTAAAAACCATATCGATATCGCTCACCTCCGGAGCAATATGGCAACCTGTTATATGCAATTGGGTCTTGGGGAATACCCTCGAGCAATTAACGAATGTAATTTAGCATTGGAAGTATCACCAAGATATAGTAAAGCTCTGTTGAAAAGGGCAAAGTGCTATGAAGCATTGAATCGGTTGGATTTTGCATTCAGGGATGTTAATACTGTTTTGAGCGTGGAGCCTAGTAACCTTACCGCATTGGAGATTCTGGAGAGTGTGAAAAAGACAATGGAAGAAAAAGGTATCATTGTCGATGAGAAAGAGATTGGCTTAGCTAGTGTTGAGCCCCCTGCTTCTCGTTTGCGTAAAGTggtaaaagagaaattaaggaaaaagaaaaataaaaaaattgacgaCAAGGCAGAGGATAAGGTGGTTGTTCAGGAGAATGTGAGTGCTGTTAAGGATAAAGAAGTGGTTACAACAacagttgaagaagaaaaacttgtAGTCGAACCCGTTAAGGAAGAAAAAGTGGTCACAAGGACGGTGAAGTTAGTACATGGAGAGGATATAAGGTGGGCACAGTTACCAATGAATTGTAGTGTGAGGTTGGTAAGGGATATTGTTAGGGATCGGTTTCCAGGACTGAAGGGTGTTCTTGTGAAGTACAGGGATCAGGAAGGTGATCTGGTTACAATCACTACTACAGATGAATTAAGGCTGGCTGAATCTTCAGGTCAGGGCCCCCTTGGCTCCCTTCGGTTCTATATTACCGAAGTCAATCCAGACCAGGAACCACCATATTACGAAATAACCAATGACGATGAGGTGCAAGCTCATGGTGGAAAAACGATAGGTGTTACTGAGAAGGGGGCTACGGCAGAAGGCCACGATGTAACAAATAGGATGACTACTGTGGAGGACTGGATTATCCAGTTTGCAAGGCTTTTCAAGAACCATGTTGGGTTTGATTCTGATGAATATTTGGATCTTCATGAGCTTGGAATGAAGCTATATTCAGAAGCAATGGAGGATACAGTAACAAGTGATGACGCTCAAGGAATTTTTGAAATTGCTGCAGATAAATTTCAAGAGATGGCAGCTTTGGCAGTATTTAATTGGGGGAATATCCACATGTCCAGGGCAAGGAAGCGAGTTTCCTTTCCAGAGGACGGGTCAAGGGAATCTGCTCTTGAGCATATTAAAGCAGCTTATGAGTGGGCTCAAAAGGAGTACATGAAAGCAGAAATGAGATACGGAGAAGCCttgaaaatcaaaccaaactTTTACGAGGGATTTCTTGCTCTTGGGCATCAGCAGTTTGAGCAAGCAAAGCTCTGCTGGAATTATGCAATAGCATGCAAGCTGGATTTAGAAGCTCGCCCTTCTGATGAGGTTCTACAGCTCTACAACAAGGCTGAGGATAACATGGAGAAAGGCATGTTGATATGGGAGGAGATGGAGGAGCAGCGTTTAAATGGACTATCAAAATCAGATAAATTTAAGGCGCATCTAGAGAAAATGGGTTTGGATAGTCTTTTCAAAGACATCTCTTCTGATGAAGCTGCAGAGCAGGCTACAAACATGAGGTCACAAATATATCTTCTATGGGGTGCCTTATTGTACGAGCGTTCCGTTGTTGAATATAAGCTAGGCCTACCAACATGGGAAGAATGTTTGGAGGTTGcagtggagaagtttgaacttGCTGGAGCTTCTCCAACAGATATAGCTGTCATGGTAAAGAACCATTGTTCCAATCAAACAGCAGTAGAAGGTTTGGGGTTCAAAATTGATGAGATTATTCAAGCATGGAATGACATGTATGATGCCCAAAGGTGGCAGTTTGGTGTTCCTTCTTTCCGACTTGAACCATTGTTTCGTCGGCGTGTTCCAAAACTTCATTACCTCTTGGAGCAATTTTG 2135 0.4173 MGKPTGKKKDVVAQKAANANSKPIKPSERTSKAFDEDTAMFINMSQDLKEEGNRLFQKKDYEGAMLKYEKALKLLPKNHIDIAHLRSNMATCYMQLGLGEYPRAINECNLALEVSPRYSKALLKRAKCYEALNRLDFAFRDVNTVLSVEPSNLTALEILESVKKTMEEKGIIVDEKEIGLASVEPPASRLRKVVKEKLRKKKNKKIDDKAEDKVVVQENVSAVKDKEVVTTTVEEEKLVVEPVKEEKVVTRTVKLVHGEDIRWAQLPMNCSVRLVRDIVRDRFPGLKGVLVKYRDQEGDLVTITTTDELRLAESSGQGPLGSLRFYITEVNPDQEPPYYEITNDDEVQAHGGKTIGVTEKGATAEGHDVTNRMTTVEDWIIQFARLFKNHVGFDSDEYLDLHELGMKLYSEAMEDTVTSDDAQGIFEIAADKFQEMAALAVFNWGNIHMSRARKRVSFPEDGSRESALEHIKAAYEWAQKEYMKAEMRYGEALKIKPNFYEGFLALGHQQFEQAKLCWNYAIACKLDLEARPSDEVLQLYNKAEDNMEKGMLIWEEMEEQRLNGLSKSDKFKAHLEKMGLDSLFKDISSDEAAEQATNMRSQIYLLWGALLYERSVVEYKLGLPTWEECLEVAVEKFELAGASPTDIAVMVKNHCSNQTAVEGLGFKIDEIIQAWNDMYDAQRWQFGVPSFRLEPLFRRRVPKLHYLLEQF 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02369 711 PANTHER PROTEIN CLMP1 1 710 IPR044517 -
Bva06g02369 711 PANTHER PROTEIN PHOX4 1 710 - -
Bva06g02369 711 SMART tpr_5 45 78 IPR019734 GO:0005515
Bva06g02369 711 SMART tpr_5 466 499 IPR019734 GO:0005515
Bva06g02369 711 SMART tpr_5 83 118 IPR019734 GO:0005515
Bva06g02369 711 SMART tpr_5 119 152 IPR019734 GO:0005515
Bva06g02369 711 Gene3D - 237 330 - -
Bva06g02369 711 CDD PB1 252 328 - -
Bva06g02369 711 MobiDBLite consensus disorder prediction 1 31 - -
Bva06g02369 711 SUPERFAMILY TPR-like 45 523 IPR011990 GO:0005515
Bva06g02369 711 Gene3D Tetratricopeptide repeat domain 42 171 IPR011990 GO:0005515
Bva06g02369 711 Pfam PB1 domain 250 328 IPR000270 GO:0005515
Bva06g02369 711 ProSiteProfiles TPR repeat profile. 45 78 IPR019734 GO:0005515
Bva06g02369 711 SUPERFAMILY CAD & PB1 domains 249 338 - -
Bva06g02369 711 SMART PB1_new 250 330 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02369 Bva-Chr6 15283920 15288475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02369 28 152 Calmodulin-binding Proteins AT3G25230 29.851 5.11e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02369 - - jre:109002799 1035.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00404 10 4371501 4375874 Bva06g02369 06 15283920 15288475 BWGD