Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02354 atgaaaatgaagcttctttttctgcttctcGTTGTTTTTCATGAACCCATTTGGGTTTTTGCAATATCAGACCCTCTTGTTTCCACACCTCCACTCTCACCCAATTCTCCAATTCCCTCATCAATGGCTGCTTTGCCCCCAGGCATTCATATGGGTAATGAAGAGCACCGAATGaattcaaacaagaaaacGCTAACAGCGCTCGTCGGAGCTGGCACAGCACTTGTTGCTgtcattttgtgttttttatgGCTGTGGATTCATTATAGGAAATTTCCGTCCAAATCCAAGAAGAGTTTTAAAAACTCAGATGCTGAGAATGGGGTGGCGTTAGCTCCATTTTTGAGTAAATTCAATTCCATAAAGATGGTTGGTATGAAGGGGCCTGTTCCAATCATTGAATATAAGCAAATAGAGCAATCGACAAACAATTTTCGGGAGAGTAACATATTGGGCGAGGGTGGATTTGGATGTGTTTACAAGGCTCGGTTGGAAGACAAATTGGATGTTGCAGTTAAGAAACTATACTGTGAGAGTCAGTATGCCGAGAGAGAATTTGAGAACGAGGTGGAATTGTTAAGTAAAATTCAGCATCCAAATGTAATTTCTTTACTGGGTTGTAGCATTAATGGCGACACCAAGTTTATTATCTATGAATTGATGCAAAATGGATGCCTGGAAACTCAATTacatgGGCCTTCTCGTGGGTCAGCATTAACTTGGCATGCGAGAATGAAGATTGCTCTTGATACAGCAAGAGGCTTAGAATATCTACACGAGCACTGTCGCCCACAAGTGATCCATAGAGATCTGAAATCATCTAATATTCTTTTAGATGCAAACTTCAATGCCAAGCTTTCTGATTTTGGTCTTGCCGTAGCCGATGGGTCCCAAGACAAGAATAACATGAAGCTCTCCGGCACCTTGGGTTATTTAGCCCCGGAATATCTCTTAGATGGTAAATTGACTGACAAGAGTGATGTCTATGCTTTTGGAGTCGTGCTTCTTGAGCTTCTACTGGGAAGAAGGCCCGTGGAAAAATTGGCACCAGCTCAGTGTCAATCTATCGTCACGTGGGCCATGCCACAGCTCACAGACAGAACCAAGCTACCAAACATTGTGGATCCAGTGATTAAGAATACAATGGATCCGAAGCATTTGTATCAGGTTGCTGCGGTGGCGGTGCTATGCGTGCAACCAGAACCGAGTTACCGGCCGCTGATCACAGATGTTCTCCACTCGCTCATCCCTCTTGTTCCTGTTGAGCTCGGAGGAACCCTGAGAGTTTCCCAAGTCACAGAACGAGTCCATCCTACTGACTG 1322 0.4228 MKMKLLFLLLVVFHEPIWVFAISDPLVSTPPLSPNSPIPSSMAALPPGIHMGNEEHRMNSNKKTLTALVGAGTALVAVILCFLWLWIHYRKFPSKSKKSFKNSDAENGVALAPFLSKFNSIKMVGMKGPVPIIEYKQIEQSTNNFRESNILGEGGFGCVYKARLEDKLDVAVKKLYCESQYAEREFENEVELLSKIQHPNVISLLGCSINGDTKFIIYELMQNGCLETQLHGPSRGSALTWHARMKIALDTARGLEYLHEHCRPQVIHRDLKSSNILLDANFNAKLSDFGLAVADGSQDKNNMKLSGTLGYLAPEYLLDGKLTDKSDVYAFGVVLLELLLGRRPVEKLAPAQCQSIVTWAMPQLTDRTKLPNIVDPVIKNTMDPKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLIPLVPVELGGTLRVSQVTERVHPTD 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02354 440 Gene3D Phosphorylase Kinase; domain 1 109 220 - -
Bva06g02354 440 ProSiteProfiles Protein kinase domain profile. 145 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02354 440 Pfam Protein tyrosine and serine/threonine kinase 148 382 IPR001245 GO:0004672|GO:0006468
Bva06g02354 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Bva06g02354 440 Gene3D Transferase(Phosphotransferase) domain 1 221 420 - -
Bva06g02354 440 PANTHER BNAA04G14780D PROTEIN 33 435 - -
Bva06g02354 440 SUPERFAMILY Protein kinase-like (PK-like) 121 415 IPR011009 -
Bva06g02354 440 CDD STKc_IRAK 151 418 - -
Bva06g02354 440 SMART serkin_6 145 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02354 440 ProSitePatterns Protein kinases ATP-binding region signature. 151 174 IPR017441 GO:0005524
Bva06g02354 440 PANTHER OS01G0750732 PROTEIN 33 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02354 Bva-Chr6 15207591 15211139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02354 16 361 Receptor kinase-like Gene Family AT1G80640 46.281 5.60e-99 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Bva06g02354 PK_Tyr_Ser-Thr 2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02354 - - gmx:100812044 649.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00421 10 4464275 4467355 Bva06g02354 06 15207591 15211139 BWGD