Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02353 ATGATAAATCAGTCCAGAACTAATGATAAAAGGCGCAGCCTAGGGTTTCTTCCGCTCAGGGTTTTCGCTCCTTGCATTTGTTCCTCACCACGCTCGGCGCAGTTGAACCCCGGCGTTGAAGCGAAAATGCCGTCACACAAGACTTTCAGAATCAAGAAGAAGCTCGCGAAGAAGATGAGGCAGAATAGGCCTATTCCCTACTGGATCCGTATGAGGACCGATAACACCAtcagGTACAACGCCAAGCGCCGCCACTGGCGCCGCACCAAGCTTGGATTCTG 281 0.5125 MINQSRTNDKRRSLGFLPLRVFAPCICSSPRSAQLNPGVEAKMPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02353 93 Pfam Ribosomal L39 protein 51 91 IPR000077 GO:0003735|GO:0005840|GO:0006412
Bva06g02353 93 Hamap 50S ribosomal protein L39e [rpl39e]. 43 93 IPR000077 GO:0003735|GO:0005840|GO:0006412
Bva06g02353 93 PANTHER RIBOSOMAL PROTEIN L39E 25 93 - -
Bva06g02353 93 Gene3D Ribosomal protein L39e 43 93 IPR023626 -
Bva06g02353 93 ProSitePatterns Ribosomal protein L39e signature. 72 88 IPR020083 GO:0003735|GO:0005840|GO:0006412
Bva06g02353 93 PANTHER 60S RIBOSOMAL PROTEIN L39-2 25 93 - -
Bva06g02353 93 SUPERFAMILY Ribosomal protein L39e 45 92 IPR023626 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02353 43 93 Cytoplasmic Ribosomal Protein Gene Family AT4G31985 90.196 1.92e-29 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02353 K02924 - sspl:121807082 112.849