Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02348 ATGGAAAGACTGAGCAACGAGCCTTATCGGTGTGATAACCCCAGCATCTTCTCTACTCCAGAGGCTCCTCCTAGTCCGAGTACACCATTGCAGAATCCACAAGAGAAGAAGCAGCAGCAATCTGTtgaggaagatgaagaagaaaaagagacaaagtccgaaactttattGGATCTGAATGTCTCTGGTGATGATTCTGCTCTTGGATGCAATACAGAGCTCAATCTCTTCAACTGTTACGATATGGGTTCGCCTAAGATTTCATCAGAACACCCTTTTGGTTCTGAAGCTGAACCAAGAGTTTTCTCTTGCAACTACTGTCAGAGAAAGTTCTACAGTTCACAAGCACTTGGAGGACACCAAAATGCCCATAAGAGGGAGAGATCAATAGCAAAAAGAGGACAAAGATTGGGAACACAGCTAATGGCCTCTGCAGCAGGTTTTGGTCACCCTTTTCTGCATAATCATCGCTACACAAGCATGGCCTCTCTACCTCTCCATGGTGCTTGTAATAAACCTCTTGGAATTCAAGCACACTCTGTGATCCAGAAGCCTTCTCACATATCGATTGGAAGCAGTTATGGACACCGTGGTTGGTCAAGACCAGTTATTGATCAACAACCCGGGATAGGGAAACTAGGTATCGAAAGTTTTCACAGAACAACGTCAAGAGGCAGTGTAGGTAGATTTGACACGGTAAAAACGATGATGAATTCTGTAGCTACAGAAGAATTCAATGAATACTTGGTAACTGGAACTCGTTTGAAGAATAATCACGAAGAGATGAAGCAGCTTGATTTGTCCCTCAAGCTATA 815 0.416 MGSPKISSEHPFGSEAEPRVFSCNYCQRKFYSSQALGGHQNAHKRERSIAKRGQRLGTQLMASAAGFGHPFLHNHRYTSMASLPLHGACNKPLGIQAHSVIQKPSHISIGSSYGHRGWSRPVIDQQPGIGKLGIESFHRTTSRGSVGRFDTVKTMMNSVATEEFNEYLVTGTRLKNNHEEMKQLDLSLKL 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02348 190 ProSiteProfiles Zinc finger C2H2 type domain profile. 21 48 IPR013087 -
Bva06g02348 190 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 1 190 IPR044246 GO:0009788
Bva06g02348 190 ProSitePatterns Zinc finger C2H2 type domain signature. 23 43 IPR013087 -
Bva06g02348 190 Gene3D Classic Zinc Finger 6 67 - -
Bva06g02348 190 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 190 - -
Bva06g02348 190 SUPERFAMILY beta-beta-alpha zinc fingers 18 48 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02348 Bva-Chr6 15181041 15182137 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02348 14 190 C2H2 Transcription Factor Family AT5G10970 46.354 3.74e-42 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva06g02348 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00429 10 4498057 4499121 Bva06g02348 06 15181041 15182137 BWGD