Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02341 ATGGCAAAGTGTCATCAGAACGACGTCGGATCTCTAGTTCTCGGCCATCACGATCCTACTGGGAGTGCAACTGGTGGCGGACACTTCCGGCTTTGGAACACCTTCTCCGCTTCGTCATTTCGCCGCATCATTTTTGACGCCGTTAGCTGTGGAGGTAGCTCTCGCTATCACCACCGTCATCGTGATGATGACTTTAGCtgctcctcctcctcctcctcaaCGACGATATCAGACTCGGGAAACTTGAAGGAAAAGCAGGGACAGGGAGATTCCGAGTCTCATCCAAAACCGAATGCTAGGTCCGAGAAGTTATCGGATCTTCTGAATATTGCAGAGTCTGAAATTAACgctgaaacgaagaagaaggaagaggcATTGGAGGAGATGAAACGAATCGTGAAGGAGTTGCAGGGAGAGGATTTAGAGAAGCAGAAAATGGCTGCGTCCAATGTGAGAAAGCTTGCCAAGGAAGACTTGGAACTCAGAGGGACACTAGCAATGCTCGGAGCAATTCCACCTTTAGTTGGAATGCTTGATTTGGAAGACGTTCATTCTCAGATCGCTTCGCTCTATGCGTTACTCAATCTAGGGATCGGCAACGATGCAAACAAAGCAGCCATTGTCAAAGTTGGTGCTGTTCATAAGTTGCTAAAGCTGATTGAATCCTCTACAGCGCCAGATTCCTCAGTCTCTGAAGCGATTGTTGCAAATTTCCTTGGTTTGAGCGCTTTGGATTCAAATAAACCAATAATTGGATCCTCCGGTGCAGTACCATTCCTGGTTAGGACCgttgaaaatttggaaaataaaagtagcCCCCAAGCTAAGCAAGATGCTCTCCGAGCGTTGTACAATCTTTCAATCTACCCAAACaatatttcattcattttggaAACCGATTTGGTTCCCTTTCTGGTAAACACATTAGGAGACATGGAAATCAGTGAAAGAATCCTCTCTATCCTAAGCAATTTGGTATATACTCCAGAAGGTCGAAAAGCTATTAATGCTGTGCCGGATGCAATTTCAATTCTGGTTGATGTACTGAACTGGACAGACTCACCAGGATGCCAAGAAAAGGCATCGTACATTTTGATGATTATGGCACATAAAACCTATGTTGACAGGCAGGCCATGATTGAGGCTGGGATTGTGTCATCACTGCTTGAGTTGACGCTTCTGGGCACTACATTGGCACAGAAAAGGGCCTCAAGGATATTGGAATGTTTAAGGGTAGACAAAGGGAAGCAAGTTTCTCAGAATTACGGTGGAAACTTAGGTGCAACTGTGTCTGCTCCTATTTGTGGCTCTTCATCGTCATGTCCAAAGCCAGATGGAGGTGGAAAAGAGTGTtcagaggaggaagaagatatGATGAGTGACGAGAAGAAGGCAGTGAAGCAATTAGTCCAGCAGAGTTTGCAGAACAACATGAGGAAAATTGTGAAAAGGGCTAATTTGCCACAAGATTTTGTGCCGTCAGAGCATCTTAAGTCACTCACTTCAAGTTCGACTTCCAAGAGCTTGCCATTTTA 1535 0.4228 MAKCHQNDVGSLVLGHHDPTGSATGGGHFRLWNTFSASSFRRIIFDAVSCGGSSRYHHRHRDDDFSCSSSSSSTTISDSGNLKEKQGQGDSESHPKPNARSEKLSDLLNIAESEINAETKKKEEALEEMKRIVKELQGEDLEKQKMAASNVRKLAKEDLELRGTLAMLGAIPPLVGMLDLEDVHSQIASLYALLNLGIGNDANKAAIVKVGAVHKLLKLIESSTAPDSSVSEAIVANFLGLSALDSNKPIIGSSGAVPFLVRTVENLENKSSPQAKQDALRALYNLSIYPNNISFILETDLVPFLVNTLGDMEISERILSILSNLVYTPEGRKAINAVPDAISILVDVLNWTDSPGCQEKASYILMIMAHKTYVDRQAMIEAGIVSSLLELTLLGTTLAQKRASRILECLRVDKGKQVSQNYGGNLGATVSAPICGSSSSCPKPDGGGKECSEEEEDMMSDEKKAVKQLVQQSLQNNMRKIVKRANLPQDFVPSEHLKSLTSSSTSKSLPF 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02341 511 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 511 - -
Bva06g02341 511 SMART arm_5 328 370 IPR000225 GO:0005515
Bva06g02341 511 SMART arm_5 158 198 IPR000225 GO:0005515
Bva06g02341 511 SMART arm_5 244 288 IPR000225 GO:0005515
Bva06g02341 511 SMART arm_5 289 327 IPR000225 GO:0005515
Bva06g02341 511 SMART arm_5 200 243 IPR000225 GO:0005515
Bva06g02341 511 Gene3D - 101 267 IPR011989 -
Bva06g02341 511 MobiDBLite consensus disorder prediction 85 101 - -
Bva06g02341 511 Coils Coil 452 472 - -
Bva06g02341 511 Gene3D - 268 417 IPR011989 -
Bva06g02341 511 Coils Coil 101 142 - -
Bva06g02341 511 MobiDBLite consensus disorder prediction 67 84 - -
Bva06g02341 511 MobiDBLite consensus disorder prediction 438 463 - -
Bva06g02341 511 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 1 511 - -
Bva06g02341 511 MobiDBLite consensus disorder prediction 59 102 - -
Bva06g02341 511 SUPERFAMILY ARM repeat 128 410 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02341 Bva-Chr6 15132413 15135651 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02341 118 411 U-box Gene Family AT2G23140 32.095 7.01e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02341 - - zju:107422474 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00434 10 4525127 4527841 Bva06g02341 06 15132413 15135651 BWGD