Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02335 ATGGAATTAACGTCTTCTCTTGATCTGAACGTTGATCCTTCTGGCCACATGGATGTTGCGGTGGAGATGTTGATGGAAGAGTTGCATCGCCTGAACAGTGAGAATAAGAAACTAAGTGAGGCGTTGAGGCATCTGTGCGAGAGCTACAATTCTTTGAAGAAACAATTGAAGAGAAAGGACAGCAGCAACTGTAATATCAATTTGTTTGGTATTAGTGAGTGCAGTACCAGCCAGGAGCTGGAACCATGCAAAAGGCCATGCAGGGAAAACACCAACTTCACAACACCAAAGATTTCCAAAGTTCTTGTACGGACTGCACCATCTGACACCGGCTTATATGTGATGGATGGATACCAGTGGAGAAAATATGGTCAGAAGGTTACCAGAGATAACCCATCGCCTAGGGCTTACTTCAAGTGCTCCTTTGCCCCAAACTGCCCGGTCAAAAAGAAGgtGCAAAGAAGCGTAGATGACCCAGGAGTGTTGGTGGCAACTTACGAAGGAGAGCACAACCACTCGCCGCGTGGCTTTAGCGAATCCCTTGGTGTTTCGACGTCACCCATTGCTAGGAACACAGGCCCGACGGTAACACTTGACCTAGTCCCCTCATCAGATGTCCAAAGCTCCACTCAGCAGTTGCTGGTTCAACAAATGGCTACTTGTTTGACTAGAGATCCCAATTTCAGAGCAGCACTTGCCACCGCCATTTCtgaaaaaaatttggttttggACAACACTTcttctaatattta 752 0.4535 MELTSSLDLNVDPSGHMDVAVEMLMEELHRLNSENKKLSEALRHLCESYNSLKKQLKRKDSSNCNINLFGISECSTSQELEPCKRPCRENTNFTTPKISKVLVRTAPSDTGLYVMDGYQWRKYGQKVTRDNPSPRAYFKCSFAPNCPVKKKVQRSVDDPGVLVATYEGEHNHSPRGFSESLGVSTSPIARNTGPTVTLDLVPSSDVQSSTQQLLVQQMATCLTRDPNFRAALATAISEKNLVLDNTSSNI 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02335 250 ProSiteProfiles WRKY domain profile. 116 175 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva06g02335 250 Pfam WRKY DNA -binding domain 116 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva06g02335 250 Coils Coil 21 55 - -
Bva06g02335 250 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 20 240 IPR044810 GO:0003700
Bva06g02335 250 Gene3D WRKY domain 99 175 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva06g02335 250 PANTHER WRKY TRANSCRIPTION FACTOR 40-RELATED 20 240 - -
Bva06g02335 250 SMART WRKY_cls 114 174 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva06g02335 250 SUPERFAMILY WRKY DNA-binding domain 113 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02335 Bva-Chr6 15086767 15087908 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02335 5 239 WRKY Transcription Factor Family AT1G80840 44.912 1.79e-68 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva06g02335 WRKY 1.6e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02335 - - gmx:100127373 261.536