Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02323 ATGGGAATATACCTCAGCACTCCCAAAACTGAAAAGTTTTCTGAAGATGGTGAGAATGACCGTCTTAGATATGGTTTATCATCCATGCAAGGGTGGCGTGCTACAATGGAAGATGCTCATGCTGCATATCCTGATCTGGATGCATCCACCTCATTTTTTGGTGTTTATGATGGTCATGGAGGTAAGGTGGTTGCAAAGTTCTGTGCCAAGTTTCTTCACCAACAGGTGCTCAAGAATGAAGCATATGCTGCTGGAGATGTAGAAACTGCTCTCCAGAAAGCCTTTTTTAGAATGGATGAGATGATGCGTGGTCAAAGGGGATGGAGGGAATTAGCTGTCTTGGGGGATAAGATAAACAAGTTTTCTGGAATGATAGAAGGGTACATTTGGTCTCCTCGTGGCAGTAGCAGTCTTGACCAAGCTGATGACTGGGCTTTTGAGGAGGGGCCTCATTCTGATTTTGCTGGGCCTACTTCTGGGAGCACTGCCTGTGTTGCCGTTATTAGAAACAACCAACTTCTTGTTGCGAATGCTGGTGATTCACGTTGTGTGATATCAAGGAAGGGTCAGGCATACAATTTGTCCAGGGATCACAAACCTGATCTTGAgattgaaaaggaaagaattttaaaagctGGTGGTTTCATTCATGCAGGACGAGTTAATGGCAGTTTAAATCTAGCAAGAGCTATAGGTGACATGGAGTTTAAGCAGAATAAGTTTCTGCCTCCTGAAAGACAAATAGTGACTGCCAATCCTGATATAAACACTGTTGAGCTTTgtgatgatgatgaatttCTGGTTCTGGCATGTGATGGCATCTGGGATTGCATGTCAAGCCAGCAATTGGTTGATTTTGTGCACGAACAACTGCACTCAGAAACTAAACTTTCTGTGGTGTGTGAGAGAGTACTTGACCGGTGTTTGGCTCCGTCAACTGCTGGTGGGGAGGGATGTGACAACATGACCATGATACTGGTGCAGTTCAATAAACCAACCCAGTCCACGGTACCAGAAGGAGATCAATCCTCGTCAAACAGACTAGTTGAAGCTGAAGCAAAACTGGAGAGCAGTGAAAGTTCATA 1085 0.4323 MGIYLSTPKTEKFSEDGENDRLRYGLSSMQGWRATMEDAHAAYPDLDASTSFFGVYDGHGGKVVAKFCAKFLHQQVLKNEAYAAGDVETALQKAFFRMDEMMRGQRGWRELAVLGDKINKFSGMIEGYIWSPRGSSSLDQADDWAFEEGPHSDFAGPTSGSTACVAVIRNNQLLVANAGDSRCVISRKGQAYNLSRDHKPDLEIEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLPPERQIVTANPDINTVELCDDDEFLVLACDGIWDCMSSQQLVDFVHEQLHSETKLSVVCERVLDRCLAPSTAGGEGCDNMTMILVQFNKPTQSTVPEGDQSSSNRLVEAEAKLESSESS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02323 361 MobiDBLite consensus disorder prediction 333 361 - -
Bva06g02323 361 SUPERFAMILY PP2C-like 3 331 IPR036457 -
Bva06g02323 361 SMART PP2C_SIG_2 28 329 IPR001932 -
Bva06g02323 361 SMART PP2C_4 13 327 IPR001932 -
Bva06g02323 361 CDD PP2Cc 23 329 IPR001932 -
Bva06g02323 361 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Bva06g02323 361 Pfam Protein phosphatase 2C 141 313 IPR001932 -
Bva06g02323 361 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Bva06g02323 361 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Bva06g02323 361 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 341 - -
Bva06g02323 361 Gene3D - 1 330 IPR036457 -
Bva06g02323 361 PANTHER PROTEIN PHOSPHATASE 2C 1 341 IPR015655 GO:0004722|GO:0006470
Bva06g02323 361 MobiDBLite consensus disorder prediction 333 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02323 Bva-Chr6 15025391 15030555 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02323 1 339 PP2C-type Phosphatase Gene Family AT2G25070 80.294 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02323 K17499 - pvy:116138075 643.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00452 10 4629716 4635089 Bva06g02323 06 15025391 15030555 BWGD
Bva06g02323 06 15025391 15030555 Bva06g02323 06 15025391 15030555 ECH