Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02289 ATGACATGCGGTTCTGGCATGCACTCTCACAACATATattatagaaaacaaaagaatctcATGAACACTGTGGAAACCCGAATCAAACACTTGGCGTGCACCCACTCCCATGACATGCACGCTTGCGCTCTATTGATTGGTTCACCCTTCCTCTTTGACCTCATTGGCCAGCAAGCAGAGAAAGCGGTTCTAAAACGAGGTTCTTTCCAGAGACTGTGCCTATCAGATGTAAGCAATTCGAGCTCCATTCAGGCCATTGATGATATTTCAGTTTCCCTCGTTGGCCCAAAACTTCATACATTCACCTTAGAGGAGTTAAGAGAAGCAACACATAACTTCTCATGGAGTAATCTGCTAGGTGAAGGCGGGTTTGGACCTGTATACAAGGGATTTGTTGACGATAAACTCAGGCCTGGTTTGAAGGCTCAATCGGTAGCTGTGAAACGACTTGATTTGGACGGAAAGCAGGGTCACAAGGAGTGGCTGGCAGAGATTATCTTTCTCGGACAGCTGAGGCATCCGCATCTTGTTAAGTTAATTGGCTACTGTTATGAGGAGGAGCATAGGCTTTTGGTTTACGAATTCATGGCAAGAGGCAGCTTGGAGAATCAACTCTTCAGAAGATACTCTGCTGCCTTGCCATGGTCAACAAGGATGAAAATTGCATTGGGTGCAGCGAAAGGCCTAGCCTTCCTTCATGAAACAGATAAACCTGTAATATACAGGGATTTCAAGACATCAAATATCTTACTAGACTCGGATTACACAGCTAAACTCTCAGATTTCGGGCTAGCCAAGGATGGCCCAGAAGGGGAAGAGACTCATATAACGACACGCGTAATGGGTACACAGGGCTATGCTGCTCCTGAGTACATCATGACAGGTCACCTTACAACTAAAAGTGATGTGTATAGCTATGGAGTTGTGCTGTTGGAATTGCTAACAGGAAAACGGGTAGTGGATAAGACGCGACCAAGTCGAGAGCAAAACCTGGTGGAATGGGCAAGGCCTTTGTTGAGGGATCAAAGAAAGCTGTTCCGTGTAATAGACCCAAGAGTGGAAGGCCAGTTTCCAATTAAAGGAGCTCAAAAGGTTGCTGCATTGGCTTACAAATGCTTGAGTCACAACCCAAACCCAAGAGCCACGATGAGTGATGTGGTCAAGATATTGGAGTCACTTCAGAACTTCGACGATGTATTCAAAGGACCATTTGTGTATGTAGCCGTTAGTGAAACTAGCGACGGAGACATTGTCAAAGGGAAAGAAGGATA 1271 0.45 MRIALQAEKAVLKRGSFQRLCLSDVSNSSSIQAIDDISVSLVGPKLHTFTLEELREATHNFSWSNLLGEGGFGPVYKGFVDDKLRPGLKAQSVAVKRLDLDGKQGHKEWLAEIIFLGQLRHPHLVKLIGYCYEEEHRLLVYEFMARGSLENQLFRRYSAALPWSTRMKIALGAAKGLAFLHETDKPVIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEGEETHITTRVMGTQGYAAPEYIMTGHLTTKSDVYSYGVVLLELLTGKRVVDKTRPSREQNLVEWARPLLRDQRKLFRVIDPRVEGQFPIKGAQKVAALAYKCLSHNPNPRATMSDVVKILESLQNFDDVFKGPFVYVAVSETSDGDIVKGKEG 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02289 371 Gene3D Transferase(Phosphotransferase) domain 1 144 349 - -
Bva06g02289 371 PANTHER KINASE 1B 8 362 - -
Bva06g02289 371 PANTHER OS01G0588500 PROTEIN-RELATED 8 362 - -
Bva06g02289 371 CDD STKc_IRAK 67 341 - -
Bva06g02289 371 ProSiteProfiles Protein kinase domain profile. 61 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02289 371 Gene3D Phosphorylase Kinase; domain 1 23 143 - -
Bva06g02289 371 SUPERFAMILY Protein kinase-like (PK-like) 37 340 IPR011009 -
Bva06g02289 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Bva06g02289 371 Pfam Protein kinase domain 65 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02289 Bva-Chr6 14862191 14866187 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02289 47 338 Glycoside Hydrolase AT3G07070 53.898 7.09e-105 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bva06g02289 Pkinase 1.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02289 - - gmx:100802636 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02289 06 14862191 14866187 Bva06g02289 06 14862191 14866187 ECH
Bva10g00494 10 4825033 4827380 Bva06g02289 06 14862191 14866187 ECH
Bva06g00519 06 5715699 5717929 Bva06g02289 06 14862191 14866187 ECH
Bva08g02077 08 13786419 13788436 Bva06g02289 06 14862191 14866187 ECH
Bva02g02216 02 22307079 22309424 Bva06g02289 06 14862191 14866187 ECH