Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02282 ATGGCAACTGATCTGCTGAAACTTTCACTCTCTACTCAACCGAAGCTCTGCTTCAATTacagaagaaaccatgtggttGCCCGCGTTGGCTTTTCCTCTCTATTGTCCAGGAAACGACATCGTAACATCAGACGCCCGAGCTTTCTACGGCCACCTTCGGGCCCAAAGTTTGTCGTATCAAACTCACTTGAGACTAGAATTGAGTTACTGGAGTTCCCTCTTCTTCAGCGACAGGGACACAACAAAGATTTGCCGATTCTACTCGATGTTACTGGGATGATGTGTGGAGCGTGCGTCTCCCGAGTCAAATCCATATTGTCCGCCGATGAGAGAGTCGACTCGGTCGTCGTTAACATGTTGACTGAAACAGCTGCGATTAAGTTGAAGAAACTCGAGGAGGAAGTTGCTGAGGCTTCGCCTTCGGAGACTGGTTTTTCGGACGGTGAATTGGcgaagaagaaggaggaacTGCTCGTGAAGAGTCGGAACCGTGTGGCTTTCGCTTGGACTTTGGTGGCGTTGTGTTGTGGATCTCACGCTTCGCATATTTTCCATTCTTTGGGCATTCACATTGCTCATGGATCGCTGTGGGATGTTCTTCATAATTCGTATGTCAAAGGCGGTTTAGCTTTGGGAGCATTGTTGGGACCAGGACGAGAGTTACTCTTTGATGGCCTAATGGCATTTAAGAAGGGATCACCTAATATGAACTCTCTTGTGGGATTTGGTTCTATAGCTGCCTTTATCATAAGTTCGATCCCACTACTTAACCCTGGGCTGGCATGGGATGCATCATTCTTTGATGAACCGGTCATGCTTCTCGGTTTTGTGCTCCTAGGACGTTCTCTTGAAGAAAAGGCACGGATTCAAGCATCAAGTGATATGAATGAACTTCTGTCTCTAATATCTACTCAGTCACGACTTGTCATTACCTCCTCAGAAAGTGCTCCATCTACTGACAGTGTGCTTAGCTCTGAAGCGATTTGTGTGGAAGTCCCAACTGATGATATTCGAGTAGGAGACTCAGTGTTGGTGTTGCCAGGAGAAACTATTCCTGTAGACGGAAAGGTAATTTCGGGAAAAAGTGTTGTGGATGAATCCATGCTTACAGGAGAATCACTGCCTGTGTTTAAGGAAGAAGGCCTTACAGTTTCAGCGGGAACTATAAATTGGGATGGTCCTTTAAGGATTGAAGCTTCTTCCACTGGCTCCAACACAATGATATCCAAGATTGTCCGCATGGTTGAGGATGCTCAATCTCGTGAAGCACCGGTGCAAAGGCTTGCAGATTCAATAGCTGGGCCGTTCGTATACAGTGTAATGACTCTGTCGGCGGCAACATTTGGATTTTGGTATTTTATTGGGTCAAACGTTTTTCCAGATGTTTTACTTAACGATATTGCGGGCCCAGAAGGAGATCCTTTGCTTTTGAGCTTGAAACTCGCTATCGATGTCTTGGTTGTCTCTTGCCCTTGTGCACTTGGGCTTGCCACACCCACAGCAATCCTAGTTGGCACCTCACTGGGGGCAAGAAAAGGACTTCTCATAAGAGGAGGAGATACAGGAACCATCACCAGAGGAAAACCAGTTGTTTCTGCCATAGGCTCTTTCGTTTATGGAGAAGCAGATGTTCTTCGGATCGCTGCTGCAGTTGAGAAAACGGCGTCACATCCAATAGCAAAGGCCATCGTCAAAGAAGCTGAATCATTAGAACTGGTCCTTCCAATCACAAAAGGACAATTTGTTGAACCAGGTTTTGGAGCCTTGGCAGAAATTGATGGACGTTTGGTTGTAGTTGGTGCTTTAGAATGGGTTCATGAACGGCTCCAAACAAGAGTGAAACCATCTGACTTGGTGAATCTGGAACATGCTCTGATGAATCAATCATGGAAAAAGACATCTTCAAACAATTCAAAAACTATTGTTTATGTTGGACGAGAAGGAGAGGGCATGATTGGTGCTATCGTCATATCTGACGTTTTGCGTGATGATGCTCAATCAACTGTGATGAGACTCCAGCAGAAGGGTATTAAAACTGTCATCTTATCGGGAGACAGGGAAGAGGCAGTTGCAAGTATAGCAGAGACAGTGGGAATAGAAGATGATTTTATCAAAGCATCATTGACTCCACAGCAGAAATCTGAATTTATTTCCTCTCTGAAAGCTGTTGGACATTGTGTTGCGATGGTAGGTGATGGGATAAATGATGCACCTTCTTTAGCTGTAGCTGATGTTGGGATAGCTATGCAGAATGAAGCTCAAGAGAATGCTGCATCAGATGCAGCATCCATCATACTTCTTGGGAACAACATTTCTCAAGTTGTTGATGCGCTAGAGCTTGCACAAGCTACAATGGCAAAAGTGTATCAGAACCTGTCTTGGGCGATAGCTTACAATGCCCTTGCCATACCCGTCGCTGCTGGTGTGTTACTTCCTCATTTTGAATTTGCTATGACACCTTCACTCTCAGGAGGACTAATGGCTTTGAGCTCCATTTTCGTGGTTGGCAACTCATTGCTTCTACAGCTACACGGGTCCACGAAGAGCCCGCGTCAATCACATGATTG 2567 0.4496 MATDLLKLSLSTQPKLCFNYRRNHVVARVGFSSLLSRKRHRNIRRPSFLRPPSGPKFVVSNSLETRIELLEFPLLQRQGHNKDLPILLDVTGMMCGACVSRVKSILSADERVDSVVVNMLTETAAIKLKKLEEEVAEASPSETGFSDGELAKKKEELLVKSRNRVAFAWTLVALCCGSHASHIFHSLGIHIAHGSLWDVLHNSYVKGGLALGALLGPGRELLFDGLMAFKKGSPNMNSLVGFGSIAAFIISSIPLLNPGLAWDASFFDEPVMLLGFVLLGRSLEEKARIQASSDMNELLSLISTQSRLVITSSESAPSTDSVLSSEAICVEVPTDDIRVGDSVLVLPGETIPVDGKVISGKSVVDESMLTGESLPVFKEEGLTVSAGTINWDGPLRIEASSTGSNTMISKIVRMVEDAQSREAPVQRLADSIAGPFVYSVMTLSAATFGFWYFIGSNVFPDVLLNDIAGPEGDPLLLSLKLAIDVLVVSCPCALGLATPTAILVGTSLGARKGLLIRGGDTGTITRGKPVVSAIGSFVYGEADVLRIAAAVEKTASHPIAKAIVKEAESLELVLPITKGQFVEPGFGALAEIDGRLVVVGALEWVHERLQTRVKPSDLVNLEHALMNQSWKKTSSNNSKTIVYVGREGEGMIGAIVISDVLRDDAQSTVMRLQQKGIKTVILSGDREEAVASIAETVGIEDDFIKASLTPQQKSEFISSLKAVGHCVAMVGDGINDAPSLAVADVGIAMQNEAQENAASDAASIILLGNNISQVVDALELAQATMAKVYQNLSWAIAYNALAIPVAAGVLLPHFEFAMTPSLSGGLMALSSIFVVGNSLLLQLHGSTKSPRQSHD 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02282 855 Gene3D - 86 147 - -
Bva06g02282 855 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 547 822 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva06g02282 855 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 317 506 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva06g02282 855 PANTHER ATP7, ISOFORM B 86 843 - -
Bva06g02282 855 CDD HMA 88 145 IPR006121 GO:0046872
Bva06g02282 855 PRINTS P-type cation-transporting ATPase superfamily signature 730 749 - -
Bva06g02282 855 PRINTS P-type cation-transporting ATPase superfamily signature 365 379 - -
Bva06g02282 855 PRINTS P-type cation-transporting ATPase superfamily signature 517 531 - -
Bva06g02282 855 PRINTS P-type cation-transporting ATPase superfamily signature 675 685 - -
Bva06g02282 855 Pfam haloacid dehalogenase-like hydrolase 521 744 - -
Bva06g02282 855 Pfam Heavy-metal-associated domain 88 132 IPR006121 GO:0046872
Bva06g02282 855 SUPERFAMILY Calcium ATPase, transmembrane domain M 268 518 IPR023298 -
Bva06g02282 855 Gene3D - 528 661 IPR023299 GO:0000166
Bva06g02282 855 SUPERFAMILY HMA, heavy metal-associated domain 86 129 IPR036163 GO:0046872
Bva06g02282 855 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 236 841 IPR027256 GO:0006812|GO:0016021|GO:0019829
Bva06g02282 855 Pfam E1-E2 ATPase 328 512 - -
Bva06g02282 855 ProSiteProfiles Heavy-metal-associated domain profile. 85 149 IPR006121 GO:0046872
Bva06g02282 855 SUPERFAMILY HAD-like 521 838 IPR036412 -
Bva06g02282 855 Gene3D - 288 419 - -
Bva06g02282 855 Gene3D - 521 781 IPR023214 -
Bva06g02282 855 SUPERFAMILY Calcium ATPase, transduction domain A 329 415 IPR008250 -
Bva06g02282 855 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 521 647 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02282 Bva-Chr6 14821207 14828951 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02282 228 852 Primary Pumps ATPases AT1G63440 35.835 7.33e-104 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02282 K17686 - gmx:100127402 1277.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02282 06 14821207 14828951 Bva06g02282 06 14821207 14828951 ECH