Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva06g02276 | atggtaAGGCCTTCAGCGACCAGACAGAGTCACAATACAGAAGCCTGTAGAGGAGCGTGGACAGGTGAGGAGGACCAGAAACTGGTCCAAGCCATTGAACTTTATGGCCCAAGGAGGTGGAATGTCGTTGCAGCCAATGCTGGTCTAAATCGATGTGGAAGAAGTTGCAGATTGAGATGGTTGAATTACCTTAGACCCAATATCAAGATAGGCAATATAACAGACCAAGAGGAGGATTTAATATTAAGGCTTCATAAACTTTTGGGGAACAGGTGGTCGTTGATTGCTGGAAGACTCCCAGGTCGAACTGACAATGAGATCAAGAATTATTGGAACTCTCATTTGAGCAAGAAGATAAAGcttcaaaaccaaaacagGGTTTTGAAAATGGAGTCCATGCATACGCAGCCACCAGAGATAGATGCAGTTAAGGTCCTTGAGGATAATGAAAAAGCTACCACTAAGGTTGAGGAAGAATCTAAGACGACTAGGTTTATTGAAGGTGATGACCTGTTTCATTGTGCTGACGAGGACCCGCTGAGTTTGGAATGGATGAGTAAATTTCTTGACCTAGACGAAAGTTGGTTCGAATTTGCATA | 599 | 0.4207 | MVRPSATRQSHNTEACRGAWTGEEDQKLVQAIELYGPRRWNVVAANAGLNRCGRSCRLRWLNYLRPNIKIGNITDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKIKLQNQNRVLKMESMHTQPPEIDAVKVLEDNEKATTKVEEESKTTRFIEGDDLFHCADEDPLSLEWMSKFLDLDESWFEFA | 199 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva06g02276 | 199 | Gene3D | - | 74 | 162 | - | - | |
Bva06g02276 | 199 | PANTHER | TRANSCRIPTION FACTOR MYB8-RELATED-RELATED | 11 | 198 | - | - | |
Bva06g02276 | 199 | CDD | SANT | 19 | 64 | IPR001005 | - | |
Bva06g02276 | 199 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 17 | 64 | IPR017930 | - | |
Bva06g02276 | 199 | ProSiteProfiles | Myb-like domain profile. | 12 | 64 | IPR001005 | - | |
Bva06g02276 | 199 | Gene3D | - | 17 | 69 | - | - | |
Bva06g02276 | 199 | PANTHER | TRANSCRIPTION FACTOR MYB114-LIKE | 11 | 198 | - | - | |
Bva06g02276 | 199 | SMART | sant | 69 | 117 | IPR001005 | - | |
Bva06g02276 | 199 | SMART | sant | 16 | 66 | IPR001005 | - | |
Bva06g02276 | 199 | SUPERFAMILY | Homeodomain-like | 16 | 111 | IPR009057 | - | |
Bva06g02276 | 199 | CDD | SANT | 74 | 115 | IPR001005 | - | |
Bva06g02276 | 199 | Pfam | Myb-like DNA-binding domain | 73 | 115 | IPR001005 | - | |
Bva06g02276 | 199 | Pfam | Myb-like DNA-binding domain | 17 | 64 | IPR001005 | - | |
Bva06g02276 | 199 | ProSiteProfiles | Myb-like domain profile. | 65 | 115 | IPR001005 | - | |
Bva06g02276 | 199 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 65 | 119 | IPR017930 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva06g02276 | Bva-Chr6 | 14789692 | 14790505 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva06g02276 | 7 | 143 | MYB Transcription Factor Family | AT5G40330 | 54.745 | 2.17e-52 | 166 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Bva06g02276 | Myb_DNA-binding | 2.4e-16 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva06g02276 | K09422 | - | qsu:111997867 | 257.299 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bva06g02276 | 06 | 14789692 | 14790505 | Bva06g02276 | 06 | 14789692 | 14790505 | ECH | |
Bva10g00511 | 10 | 4917721 | 4918773 | Bva06g02276 | 06 | 14789692 | 14790505 | ECH | |
Bva05g01101 | 05 | 5676798 | 5678307 | Bva06g02276 | 06 | 14789692 | 14790505 | ECH |