Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02263 ATGAGTTTAAGAGCAGCCGAGGACGATTCGGCTTCAGAAATCCATATCCCAGCGGAGATAGATTGGCATATGCTGGATAAGTCCAAATTCTTCTTGCTTGGCGCCGCTTTATTTTCCGGTGTATCAGCTGCGCTATATCCTATTGTTGTGTTGAAGACCCGCCAACAGGTTTGTTCAACACAAATTTCTTGCTTCAAGATGTCTTTCGCCATTATGCATTACGAAGGTTTCAGAGGGTTTTACAAAGGTTTCGGCACTTCCTTGATGGGAACAATCCCTGCTCGAGCACTATACATGGGTGCCCTCGAAGTTACCAAGAGTAATGTTGGTACTGCCACTGTTGGATTAGGGTTTTCAGATACCACAGCCGCAGCCATTGCTAACGCTGCTGCTGGGGTGAATTCTGCCATGGCTGCCCAATTAGTTTGGACCCCAATAGATGTTGTGAGCCAGAGACTCATGGTTCAAGGCTGCAGTAGCAGCAGTGGAAGCAAAAACATACTGTCTAGTGTTCATTCTGGTGGGAATTACAGGAATGGTCTTGATGCGTtcagaaaaattgtttatgcAGATGGACTGAGAGGATTGTACAGGGGATTTGGGATTTCAATATTGACATATGCACCATCCAATGCCGTTTGGTGGACTTCTTATTCTATGGTTCATAGGCTTATCTGGGGTGCTTTTGGTTGCCACATGGGTAAGAGGGATGAGAGTAATTTAGCCAATAGATACAGTTTTAGGCCTGATTCTAGGGCAATGGTAGCTGTACAAGGGTTGAGTGCCGTTATGGCCAGTGGGGTTTCGGCAATTATAACTATGCCACTTGATACAATTAAGACGAGGTTGCAGGTCTTGGATACAGaggaaaatggacgaagaagACCATTAACTGTTATGCAGACTGTTAGGAATTTGGTGAAGGAAGGTGGCCTTATTGCTTGTTACAGAGGATTGGGGCCAAGGTGGGCTTCAATGTCCATGTCTGCAACAATTATGATTACCAGCTATGAGTTTTTGAAACGAATGTCTACAAAAAGCCGAGAGAAATTAACTGCATCTGCATG 1067 0.4349 MSLRAAEDDSASEIHIPAEIDWHMLDKSKFFLLGAALFSGVSAALYPIVVLKTRQQVCSTQISCFKMSFAIMHYEGFRGFYKGFGTSLMGTIPARALYMGALEVTKSNVGTATVGLGFSDTTAAAIANAAAGVNSAMAAQLVWTPIDVVSQRLMVQGCSSSSGSKNILSSVHSGGNYRNGLDAFRKIVYADGLRGLYRGFGISILTYAPSNAVWWTSYSMVHRLIWGAFGCHMGKRDESNLANRYSFRPDSRAMVAVQGLSAVMASGVSAIITMPLDTIKTRLQVLDTEENGRRRPLTVMQTVRNLVKEGGLIACYRGLGPRWASMSMSATIMITSYEFLKRMSTKSREKLTASA 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02263 355 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 224 IPR018108 -
Bva06g02263 355 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 350 - -
Bva06g02263 355 ProSiteProfiles Solute carrier (Solcar) repeat profile. 27 108 IPR018108 -
Bva06g02263 355 Pfam Mitochondrial carrier protein 35 108 IPR018108 -
Bva06g02263 355 Pfam Mitochondrial carrier protein 125 226 IPR018108 -
Bva06g02263 355 Pfam Mitochondrial carrier protein 257 347 IPR018108 -
Bva06g02263 355 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 350 - -
Bva06g02263 355 ProSiteProfiles Solute carrier (Solcar) repeat profile. 253 343 IPR018108 -
Bva06g02263 355 Gene3D Mitochondrial carrier domain 29 354 IPR023395 -
Bva06g02263 355 SUPERFAMILY Mitochondrial carrier 23 340 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02263 Bva-Chr6 14741894 14743637 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02263 1 349 Chloroplast and Mitochondria Gene Families AT1G72820 67.045 3.07e-167 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02263 K15121 - tcc:18588117 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02263 06 14741894 14743637 Bva06g02263 06 14741894 14743637 ECH
Bva10g00529 10 4980046 4981749 Bva06g02263 06 14741894 14743637 ECH