Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02256 ATGTCGTCTGCGGTTATAGTGCCATTGAGAGTAGGTAATTCTGTCTGTGATAACCCAACAATAGTTACCCATATGGATATGGATGTATCCAGACTAAAGCTGATGGCAGATGCAGGCTTGTTATCTAATTCTATAATCAAGGTTTCCACTGAGACGATTGCAGGTTCTGATGAGGATCAGGATCAGAATGGTGGGGATCTGGGGAATGAAGTTAGTATTACAGTAATCACTCCACCAAAGCAGGATAGGGAAGAAAGAACTCCTTTATTGGATATGatatctcaaaataaaagCACGTTGGTTGGTACTGATGAAGCGCTAACCCCAGAAATTGAGGAGGATGATTCATTATCAGTGGAGGGTGATCAGATTATTGATAGCTCTTGTTCTCTTTCAATTGCCAGTGAGAACGGTAGTATATGTGGAGAGGAATTCATTGGTTTTGAGGCTGCTTCAGAAGTAGGAACACCAAGTTCCTTAGACATTGACAAGAGCATCCGTGGTGTCAATATTATTGCAAGGGCTGCTGATTTAGGGGACTCTAATGTTGAGGGAGGAATTGCCAGTGGACCCCTTGCTGTGACAGTGAACCTTGATGAAGAAACCGGGATTGGATCTGGTGCAAAGCTTTCCACGGTTGTTCTTCAGCTGCCTCTAGAAAAAGGGGTGAGTGGAACGGTTGGTCGTAGTGTTTTTGAATTGGATTATCACCCACTTTGGGGATTTATATCTGTGTGTGGAAGAAGGCCCGAGATGGAAGATGCAGTTGCAGCTGTACCTCGATTTTTAAAGATTCCTATTCAAATGCTAATTGGTGATCGAGTACTTGATGGAATGAATAAGTGTTGGAATCAGCAGAGTATTCATTTCTTTGGGGTCTATGACGGCCATGGTGGCTCTCAGGTGGCAAATTATTGTCGTGAACGTATTCATTTAGCTTTAGCTGAAGAAATAGAATTTGCCAGAGAAGGTCTAATAAATGGAAGTATCAAGGATGAATGTCAAGATCAGTGGAAAAAGGCTTTCACCAATTGTTTTCTGAAGGTTGATGCTGAGGTGGGAGGAAGAGCTAATTCTGAACCTATTGCACCTGAAACCGTTGGCTCTACTGCTGTTGTTGCTATTATCTGTTCATCTCATATTATAGTTTCAAATTGTGGTGATTCAAGAGCTGTTCTTTGTCGTGGCAAAGAACCCATGGCATTGTCGGTGGATCATAAACCAAATAGAGATGACGAATATGCAAGAATTGAAGCAGCTGGAGGCAAGGTGATACAATGGAATGGTCATCGTGTATTTGGTGTTCTTGCAATGTCAAGGTCTATTGGTGATAGATATTTGAAACCATGGATTATTCCAGAACCGGAAGTTACGTTTATTCCTCGTGCAAAAGATGATGAATGCCTCATTCTGGCCAGTGATGGGCTTTGGGATGTCTTGACAAACGAAGAAGTGTGTGACCTAGCTCGGAGACGAATACTTCACTGGCACAAGAAAAATGGCGTTTCACTACCCTCTGAAAGGGGGGAGGGAATTGACCCTGCTGCTCAAGCAGCTGCAGAGTACCTAGCAAACGTTGCTCTTCAAAAAGGAAGCAAAGATAACATCACTGTGATCGTGGTGGATTTGAAAGctcaaagaaaattcaagagcaagacatg 1661 0.4184 MSSAVIVPLRVGNSVCDNPTIVTHMDMDVSRLKLMADAGLLSNSIIKVSTETIAGSDEDQDQNGGDLGNEVSITVITPPKQDREERTPLLDMISQNKSTLVGTDEALTPEIEEDDSLSVEGDQIIDSSCSLSIASENGSICGEEFIGFEAASEVGTPSSLDIDKSIRGVNIIARAADLGDSNVEGGIASGPLAVTVNLDEETGIGSGAKLSTVVLQLPLEKGVSGTVGRSVFELDYHPLWGFISVCGRRPEMEDAVAAVPRFLKIPIQMLIGDRVLDGMNKCWNQQSIHFFGVYDGHGGSQVANYCRERIHLALAEEIEFAREGLINGSIKDECQDQWKKAFTNCFLKVDAEVGGRANSEPIAPETVGSTAVVAIICSSHIIVSNCGDSRAVLCRGKEPMALSVDHKPNRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVTFIPRAKDDECLILASDGLWDVLTNEEVCDLARRRILHWHKKNGVSLPSERGEGIDPAAQAAAEYLANVALQKGSKDNITVIVVDLKAQRKFKSKT 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02256 553 ProSitePatterns PPM-type phosphatase domain signature. 290 298 IPR000222 GO:0043169
Bva06g02256 553 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 125 553 - -
Bva06g02256 553 CDD PP2Cc 244 543 IPR001932 -
Bva06g02256 553 Gene3D - 226 553 IPR036457 -
Bva06g02256 553 PANTHER ALPHABET, ISOFORM E-RELATED 125 553 - -
Bva06g02256 553 Pfam Protein phosphatase 2C 269 536 IPR001932 -
Bva06g02256 553 SUPERFAMILY PP2C-like 232 544 IPR036457 -
Bva06g02256 553 ProSiteProfiles PPM-type phosphatase domain profile. 239 543 IPR001932 -
Bva06g02256 553 SMART PP2C_4 234 541 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02256 Bva-Chr6 14719958 14723712 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02256 137 553 PP2C-type Phosphatase Gene Family AT1G17550 56.542 9.40e-166 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02256 K14497 - gmx:100805281 847.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02256 06 14719958 14723712 Bva06g02256 06 14719958 14723712 ECH
Bva10g00537 10 5011054 5015874 Bva06g02256 06 14719958 14723712 ECH