Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02252 ATGTCTGGTCACCAACCGTTTGATGGAAACGTTCCGCCGTTTCAATCCACCTTAGTGGCCGTTGAAAAGGACAAGAACAGTGGCTACGCCTTTCGATGGGCAATTAATCATCTTGATAACCCAGTGATCGTCGCACTCCACGTTAggaacaaaaacaaatcaaacaatcCACACCAGGGCATACATGTTTTTCCCCCGGACGATAATGATTTAGCTAATTTCTTCATTCCCTTACGAGGAGTTTGTCCTCGTAAAATGATTGAGATAAAAGAAGCAGTGCTCGATGACAGTGATGTTGCCAGAGGAATTTTAGACTTTGCAAACAAGTATTATGTCCACAGTATTGTTGTTGGTGCATCAACGAGGAACTCTATAACAAgTTTTCACAAGAAATTTAAAGGTTATGATCTACCAACAACCATAACGAGGTTAGCCCCAGATTTTAGTTCTGTGTATGTAATATCAAAAGGGAAGATAATGTCAGCTCGATCAGCACTGCGCGCTATGGCTAATTCAGTTACCCCACCAAGACAACCACCTCCACATGCACTTATACATTGTGAATCAGAAAATGTAGTAAGGGGACATCCTGCTGGAAGAGGAGGGGAGAATGAAGAATTTGACAGAAGGTCTTTTGGCAATAAGGGAATGAGAACACCAGTACGTGAGAGGCCCAGGATTTCTACTGGTAAAATATCAGTGGACAACGTTGATCTATCCACTCGTGGTCAAAGGTCACCATTTAACCGTGACTGTTCAGATGAAAGTGATTTCTCAGGGTCACTTGCGTTTGCGTCAATGGACATAGCTAAACAAGATTTGGATTTTGGCATTACATCAGATAATCCCAGGACATCATCAGCTTCCCAATCCGCACAAGAAATGGAAGCTGAGATGAAAAGATTGAGGCTTGAACTGAAGCAAACCATGGAAATGTACAGCTCAGCTTGCAAAGAGGCAATCTCAGCCACAAAGAAGGCCAACGAGATTAATCAATGGAAATTGGAGGAGGCACGCCAGGTTGAGGAAGCAAGGTTAGCCGGAGAGGCAGCTCTTGCAATGGCAGAAATGGAGAAAGCCAAAGCCATAGCTGCTATCGAGGCAGCTGAGAAAGCCAGGAAGATGGCTGAGAAGGAAGCAGAGAGAAGAAAGCAGGCAGAGATGAAGGCCAGAAGAGAGGCAGAAGAGAAAGACAGGGCATTAACTGCTTTGAATCAGGGTGATGTTCGATATAGAAAATACACCATAGAGGACATTGAAACAGCCACTGAAAAGTTCTCCCCATCAATGAAAATAGGTGAAGGTGGTTATGGACCTGTGTATAAAGGCCAACTTGATCACACGCCCGTTgcgattaaaattttaagacctGATGCTGCTCAGGGCAGGAAGCAGTTCAACCAAGAGGTTGAGGTATTAAGTCTCATTAGACATCCGAACATGGTCCTTCTCCTTGGTGCTTGCCCTGAATATGGGTGCTTGGTGTATGAATACATGCACAACGGTAGCTTAGAAGATAGATTGTTGCGGAAAAACAATACCCTGCCTATTCCGTGGTGGAAACGGTTCCAAATAGCTGCTGAGATTGCAACtgcacttctttttcttcaccaAACAAAGCCAGAACCCCTTGTGCACAGGGATCTTAAACCAGCTAACATTCTCATAGACCGAAATTACGTGAGTAAAATCAGTGATGTTGGCCTGGCACGTTTAGTTCCTCCTTCTGTAGCTGATAGTGTCACACAATATCACATGACTTCAGCTGCGGGAACATTTTGTTACATTGATCCTGAGTACCAACAAACAGGAATGTTAACAACAAAATCAGATATATATTCCTTGGGGATAACGCTACTCCAAATTATCACAGCCAAGCCTCCGATGGGTATTGCTCACCATGTTTCGAGGGCAATTCAAAAGGGAACATTTTCAGAGATGCTTGACCCTGTGGTGACTGATTGGCCAGTTGAAGAGGCTCTAGCATTTGCCAATGTAGCATTGAAATGTGCAGAGCTCAGCAAGAAGGACAGGCCGGATCTTGCTAGAGTTGTAGTGCCTGAGCTTAACAGGTTAAGAGACCTTGGGTATACGTTATCCGGTAATCAAGTTTTTAGCAGTAGCAATTTGATTCACTATATGGGACGTCCTCCTGCACATAGCAGCAATAATAGTAGTCAAACTCAGCCAGGACGTCCTCCTACTCCAACACGAAATCCACATTCAAAGACATCAATCAGCAATCGGGAGGTGAACTCTGAGTGTGGTGCTCAGGAGTCTAGATCGTCTCCAGGAAGGGAATATTACAGCAGTTA 2315 0.432 MSGHQPFDGNVPPFQSTLVAVEKDKNSGYAFRWAINHLDNPVIVALHVRNKNKSNNPHQGIHVFPPDDNDLANFFIPLRGVCPRKMIEIKEAVLDDSDVARGILDFANKYYVHSIVVGASTRNSITSFHKKFKGYDLPTTITRLAPDFSSVYVISKGKIMSARSALRAMANSVTPPRQPPPHALIHCESENVVRGHPAGRGGENEEFDRRSFGNKGMRTPVRERPRISTGKISVDNVDLSTRGQRSPFNRDCSDESDFSGSLAFASMDIAKQDLDFGITSDNPRTSSASQSAQEMEAEMKRLRLELKQTMEMYSSACKEAISATKKANEINQWKLEEARQVEEARLAGEAALAMAEMEKAKAIAAIEAAEKARKMAEKEAERRKQAEMKARREAEEKDRALTALNQGDVRYRKYTIEDIETATEKFSPSMKIGEGGYGPVYKGQLDHTPVAIKILRPDAAQGRKQFNQEVEVLSLIRHPNMVLLLGACPEYGCLVYEYMHNGSLEDRLLRKNNTLPIPWWKRFQIAAEIATALLFLHQTKPEPLVHRDLKPANILIDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSLGITLLQIITAKPPMGIAHHVSRAIQKGTFSEMLDPVVTDWPVEEALAFANVALKCAELSKKDRPDLARVVVPELNRLRDLGYTLSGNQVFSSSNLIHYMGRPPAHSSNNSSQTQPGRPPTPTRNPHSKTSISNREVNSECGAQESRSSPGREYYSS 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02252 771 MobiDBLite consensus disorder prediction 377 397 - -
Bva06g02252 771 MobiDBLite consensus disorder prediction 199 223 - -
Bva06g02252 771 MobiDBLite consensus disorder prediction 712 771 - -
Bva06g02252 771 SMART serkin_6 426 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02252 771 CDD STK_N 19 157 - -
Bva06g02252 771 Coils Coil 285 312 - -
Bva06g02252 771 Gene3D Transferase(Phosphotransferase) domain 1 499 699 - -
Bva06g02252 771 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 14 128 - -
Bva06g02252 771 ProSiteProfiles Protein kinase domain profile. 426 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02252 771 MobiDBLite consensus disorder prediction 195 223 - -
Bva06g02252 771 MobiDBLite consensus disorder prediction 718 771 - -
Bva06g02252 771 ProSitePatterns Serine/Threonine protein kinases active-site signature. 544 556 IPR008271 GO:0004672|GO:0006468
Bva06g02252 771 Coils Coil 352 398 - -
Bva06g02252 771 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 16 708 - -
Bva06g02252 771 SUPERFAMILY Protein kinase-like (PK-like) 410 685 IPR011009 -
Bva06g02252 771 Pfam Protein kinase domain 429 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02252 771 Gene3D Phosphorylase Kinase; domain 1 405 498 - -
Bva06g02252 771 PANTHER OS02G0152300 PROTEIN 16 708 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02252 Bva-Chr6 14696194 14700198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02252 89 696 Receptor kinase-like Gene Family AT5G12000 63.993 0.0 750
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Bva06g02252 PK_Tyr_Ser-Thr 3.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02252 - - minc:123200373 761.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02252 06 14696194 14700198 Bva06g02252 06 14696194 14700198 ECH
Bva10g00542 10 5037951 5042462 Bva06g02252 06 14696194 14700198 ECH