Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02243 ATGGAAGGAATTAGagtgaaagaagaagagacaTTCCCATGCACAGCTGGTGCATCTTCTTCAAGCTTGTCCCCGCAACCCATGGAGGGGTTGCACGAGGTGGGTCCACCTCCATTTCTCAGTAAGACCTACGAAATGGTTGAAGACCCGTCAACCGATTCAGTTGTGTCGTGGAGCAGAGCACGCAACAGCTTCATCGTCTGGGACTCTACCAGGTTCTCAACCGACATTCTTCCTCGCTATTTCAAGCACTGTAACTTCTCCAGCTTCGTTCGTCAGCTCAACACATAtGGTTTCAGAAAAGTTGATCCTGATCGATGGGAATTCGCAAACAAAGGGTTTTTGGCTGGACAGAAGCACTTGTTGAAGACAatcaagagaagaagaaatgtgTCACAGAGTATGCAACAGCAGAAAGGAGGACCTTGCGTTGAACTGGGTCAGTATGGATTGGAAGGTGAGCTTGAGAGATTAAGGAGAGACAGGACAGTGTTAATGGCCGAAATTGTAAAGTTGAGACAGCAACAGCAGAACTCAAGGGAGCAATTGATTGCCGCGGAGGGCAGGCTACAAGCTACAGAGAAGAAACAGCAACAGATGCTCACTTTCCTTGCTAAGGCACTTAATAACCCATCTTTTGTACAACAGCTTGTCCAGATAAACTCCCAGAACCGAGAATTACAGGGAACTGTTGAGATTAAGCGGAAGCGGAGGCTAACTGCAAGCACCAGCTTGGAGAATTTGCAACAAGATCCTACGACAGTGGCTGTGCCTAGTGAACCGGTGATGGACTATTCAAGCCAAGAGCAACAACAAGAATTGGCAACCGTGGAATCTGAGATAGATGATTTTTTCTCTGCTGCTAATGATAACGAGTTAGGCAATGAAATTGGAGATCCATTTTCAAGTTCTATGCCAACATCCAGCGGGAGCAATTTAGGTTCAGCTAGTGACGCAATGTGGGAGGACTTGCTGAACGAGGACTTTGCTGGGAATCCAGAAGAGGAAGTGATACTAGGCGACTCTCGTAAAATTGATGTATTGGTTGCACAGCCTGATGAATGGGCTGATGACTTGCAAGATCTGGTGGATGAAATGGATTATCTTGGTTGTATGATACAGAATATGAATGGTTTTGAGTATGCAGCAGAGCAGAGAAGGAGTGTTGAACAAGGAAGGAGATTTTCCGAGTG 1193 0.4484 MEGIRVKEEETFPCTAGASSSSLSPQPMEGLHEVGPPPFLSKTYEMVEDPSTDSVVSWSRARNSFIVWDSTRFSTDILPRYFKHCNFSSFVRQLNTYGFRKVDPDRWEFANKGFLAGQKHLLKTIKRRRNVSQSMQQQKGGPCVELGQYGLEGELERLRRDRTVLMAEIVKLRQQQQNSREQLIAAEGRLQATEKKQQQMLTFLAKALNNPSFVQQLVQINSQNRELQGTVEIKRKRRLTASTSLENLQQDPTTVAVPSEPVMDYSSQEQQQELATVESEIDDFFSAANDNELGNEIGDPFSSSMPTSSGSNLGSASDAMWEDLLNEDFAGNPEEEVILGDSRKIDVLVAQPDEWADDLQDLVDEMDYLGCMIQNMNGFEYAAEQRRSVEQGRRFSE 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02243 397 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-6B 19 332 - -
Bva06g02243 397 ProSitePatterns HSF-type DNA-binding domain signature. 78 102 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva06g02243 397 Pfam HSF-type DNA-binding 39 128 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva06g02243 397 PRINTS Heat shock factor (HSF) domain signature 90 102 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva06g02243 397 PRINTS Heat shock factor (HSF) domain signature 77 89 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva06g02243 397 PRINTS Heat shock factor (HSF) domain signature 39 62 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva06g02243 397 Gene3D - 32 129 IPR036388 -
Bva06g02243 397 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 19 332 IPR027725 -
Bva06g02243 397 SUPERFAMILY "Winged helix" DNA-binding domain 35 128 IPR036390 -
Bva06g02243 397 Coils Coil 155 196 - -
Bva06g02243 397 SMART hsfneu3 35 128 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02243 Bva-Chr6 14657196 14659014 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02243 25 370 HSF AT2G26150 53.541 5.16e-121 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bva06g02243 HSF_DNA-bind 2.7e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02243 K09419 - qsu:112015615 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00554 10 5093331 5095548 Bva06g02243 06 14657196 14659014 BWGD