Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02237 ATGGATGATGGCGTGAATGTGAATGGACATGAACAGAGTCAGAGTCAGAGtcggaagaaaaataaagcgTGCGCTCCATGCAGGCACCAACGCAGAAGATGCCCTTCTAACTGCCCTTTGGCTCCCTACTTCCCTGCAGATCAAGAACAAGACTTCCTCAACGCCCACAAACTGTTTGGTGTGGGGAACATACTGAAGATCATCCAAGCTTGTCAAAACTCAGAGCAGAAAAGAATGGCCGCTCAAACCATGAAATGGGAAGCAAATCGCAGAGCCGACGTAGACCCCGTTTATGGCAGTGCTGGCATCGTTTGGGATTTTTGTCAAAAGATTCAATCTTGCCAACTCGAGCTTCATTCCCTGCTTCACCAGCTTGCCCTCTACCGTCCTCAATCCCAACTTCAACTTCAGCATCAACGTCAGAATGTTAATTACCCTATATCTGGGCCACTCAAACTTGACGGGGAGGGCTCACCATTTCCGGATCAAAATCACCAAAATGACGGTTCTTA 512 0.4648 MDDGVNVNGHEQSQSQSRKKNKACAPCRHQRRRCPSNCPLAPYFPADQEQDFLNAHKLFGVGNILKIIQACQNSEQKRMAAQTMKWEANRRADVDPVYGSAGIVWDFCQKIQSCQLELHSLLHQLALYRPQSQLQLQHQRQNVNYPISGPLKLDGEGSPFPDQNHQNDGS 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02237 170 MobiDBLite consensus disorder prediction 1 24 - -
Bva06g02237 170 MobiDBLite consensus disorder prediction 7 21 - -
Bva06g02237 170 MobiDBLite consensus disorder prediction 147 170 - -
Bva06g02237 170 ProSiteProfiles LOB domain profile. 22 125 IPR004883 -
Bva06g02237 170 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 17 142 - -
Bva06g02237 170 Pfam Lateral organ boundaries (LOB) domain 23 120 IPR004883 -
Bva06g02237 170 PANTHER LOB DOMAIN-CONTAINING PROTEIN 22 17 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02237 Bva-Chr6 14629788 14630300 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02237 23 145 AS2 family AT1G72980 44.715 1.25e-26 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bva06g02237 LOB 2.8e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02237 - - mus:103999019 110.153