Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02233 ATGTTTTTGATTGAGGATCTTTGGGCACTGCTCAACCTCGAGCGTCTCGTTGGTAAATCTCATCTTCACTCAGaATCAATTTTACAGTCCATATCTGAATCCATGACGAACTCGAGTTGTGGAGGCACCGCGTTAGAGATGTGCCGAGATGAGTCAGTGGCATTCGTTCTCAAGTTTGTGGCTATGGCATCAATACTCCTCGCCGGGATGGCTGGAATTGCTGTGCCGTTGATCGGAAAGCATCGGCTCTTTCTGCGCACCGACGGCAACCTGTTCGTGGCGGCAAAGGCTTTCGCCGCAGGGGTAATTCTGGCGACAGGGTTCGTTCACATGTTGTCGGATTCTTCGGAGGCACTAACGGACCCGTGCTTGCCCAAACACCCATGGTCAAAGTTTCCCTTCACCGGTTTCTTTGCCATGATGTCCGCGCTTCTAACCTTGATGGTTGACTTTGTGGGCACTCAATATTATGAGCGAAAACAAGGGTTGACTCGGGCGAGTGAGGAACAAGTACGTGTCGTGTCACTGGAGTCGGGCGTGGAATCGGGAATTGTGGAGGTACCAGAGGCGAAGGATTTGAGTAGGATAGTGTTTGGGGAAGAGGAAAGTGGTGGAATGCACATAGTGGGAATGCATGCACATGCGGCGCATCATAGACACAGCCATCCTAATGGGCAGGACCCATGTCATGGCGCCTACAAGGAACCCTCTAACTCTCATGGACATTCCCACACTCACTCTCATGCATTAGGAGATGATGATGGAGATGGTGCTTCCCGCCACCTCGTCGTTTCACAGGTGTTGGAACTTGGTATTGTTTCACATTCAGTGATAATCGGGCTATCTCTGGGAGTTTCTCAAAGCCCATGTACGATAAGACCACTAATAGCAGCATTGTCGTTCCATCAGTTCTTTGAAGGATTCGCACTGGGAGGCTGCATCTCCCAAGCTCAATTCAAGAGTTCGTCAGCAACAATAATGGCTTGCTTTTTTGCATTAACAACGCCGGTGGGTATTGGCATTGGGACTAGCATTGCCTCGATTTATAACCCATACAGCCCAGGTGCACTGATCACCGAAGGCATTTTGGACGCCTTATCGGCTGGAATTTTAGTGTACATGGCTTTAGTAGACTTGATAGCCGCTGATTTTCTTAGCAAGAGGATGAGGTGCAACTTTAGGCTTCAAATAGCTTCTTACTGTATGCTTTTCCTGGGGGCCGGATCGATGTCTTCGCTTGCTCTCTGGGCTTG 1253 0.4964 MFLIEDLWALLNLERLVGKSHLHSESILQSISESMTNSSCGGTALEMCRDESVAFVLKFVAMASILLAGMAGIAVPLIGKHRLFLRTDGNLFVAAKAFAAGVILATGFVHMLSDSSEALTDPCLPKHPWSKFPFTGFFAMMSALLTLMVDFVGTQYYERKQGLTRASEEQVRVVSLESGVESGIVEVPEAKDLSRIVFGEEESGGMHIVGMHAHAAHHRHSHPNGQDPCHGAYKEPSNSHGHSHTHSHALGDDDGDGASRHLVVSQVLELGIVSHSVIIGLSLGVSQSPCTIRPLIAALSFHQFFEGFALGGCISQAQFKSSSATIMACFFALTTPVGIGIGTSIASIYNPYSPGALITEGILDALSAGILVYMALVDLIAADFLSKRMRCNFRLQIASYCMLFLGAGSMSSLALWA 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02233 417 MobiDBLite consensus disorder prediction 215 254 - -
Bva06g02233 417 PANTHER ZINC/IRON TRANSPORTER 35 417 - -
Bva06g02233 417 Pfam ZIP Zinc transporter 56 414 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Bva06g02233 417 MobiDBLite consensus disorder prediction 237 254 - -
Bva06g02233 417 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 35 417 - -
Bva06g02233 417 TIGRFAM zip: ZIP zinc/iron transport family 45 417 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02233 Bva-Chr6 14613949 14616086 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02233 24 417 Inorganic Solute Cotransporters AT1G60960 68.238 4.18e-176 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02233 K14709 - egr:104436300 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00563 10 5138064 5140219 Bva06g02233 06 14613949 14616086 BWGD