Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02226 ATGGGCAGGAAATGCTCTTACTGTGGAAACATGGGTCACAATTCTAGAACTTGCAACACTAAAAGAGGGGGCTTAAAGCTGTTCGGAGTGCAACTTgaactttcttcttcatcattatcatcgtcttcttcttcttctccatctaTGAGTTTTTCCCTTAAGAGAAGTTTCAGCATGGACTGCCTGCCATCTTCATCAGCTTCTCGTCTTGCTGTGAATGAGACTTCAGAGAAAATGTGTGATCATCATGATTACTTATCATCCAACGGCATCATGGAAAGAacacaagaaaggaaaaaagGTGTGCCATGGACAGAGGAGGAACACCGAGTATTTCTTCTGGGGCTTGAGAAGCTAGGCAAGGGTGACTGGAGGGGCATCTCTAAGAATTTCGTGACTACAAAAACGCCAACCCAAGTAGCGAGTCATGCACAGAAGTACTTTCTTCGGCAGAAAGGCCTCATTAAAAGAAAGCGCCGTCCCAGCCTCCTTGATGTGGGAACAGAAAAATTCTCACTCGAACAAAACAACACTTGCTTGTCTAAGCCAAGTGAAGCTTTTGGTCCATTCGGGTTTCCATCGGAGACAACTAAATTGACTTCAAATGATGTCAGTTGCAGCAGCAAAAGGATTCGTCTTTCTGAGTGGCTTTCTCGTTATCATTCAATGCTTAATTGGCCTGCCTCTTCAACTCTGAAAAACTACACTCTTCAAAGAGCAGACCCTGATTTAGAACTCAAACTTGGAGGTTGGTCCTA 758 0.4063 MGRKCSYCGNMGHNSRTCNTKRGGLKLFGVQLELSSSSLSSSSSSSPSMSFSLKRSFSMDCLPSSSASRLAVNETSEKMCDHHDYLSSNGIMERTQERKKGVPWTEEEHRVFLLGLEKLGKGDWRGISKNFVTTKTPTQVASHAQKYFLRQKGLIKRKRRPSLLDVGTEKFSLEQNNTCLSKPSEAFGPFGFPSETTKLTSNDVSCSSKRIRLSEWLSRYHSMLNWPASSTLKNYTLQRADPDLELKLGGWS 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02226 252 ProSiteProfiles SANT domain profile. 104 152 IPR017884 -
Bva06g02226 252 SUPERFAMILY Homeodomain-like 97 153 IPR009057 -
Bva06g02226 252 SMART sant 100 150 IPR001005 -
Bva06g02226 252 Pfam Myb-like DNA-binding domain 103 148 IPR001005 -
Bva06g02226 252 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 99 151 IPR006447 GO:0003677
Bva06g02226 252 PANTHER TRANSCRIPTION FACTOR KUA1 1 195 - -
Bva06g02226 252 CDD SANT 103 148 IPR001005 -
Bva06g02226 252 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 96 152 IPR017930 -
Bva06g02226 252 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 1 195 - -
Bva06g02226 252 Gene3D - 102 154 - -
Bva06g02226 252 ProSiteProfiles Myb-like domain profile. 96 148 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02226 Bva-Chr6 14573902 14574893 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bva06g02226 Myb_DNA-binding 3.1e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02226 - - qsu:112000501 223.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02226 06 14573902 14574893 Bva06g02226 06 14573902 14574893 ECH
Bva10g00572 10 5184638 5186373 Bva06g02226 06 14573902 14574893 ECH