Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02223 ATGTCAATGGAGAATGATATGTTCAGTGCTTCAGTGGAGATGGCTGGCACAAATTCTTCTGTCATTAATCCACAACATCCGACACCAAACCCACTCGTTCACTGCGATCCATTTGACCCTAATGGCCAAACCCGTATCTTGAATGAAATTTCGATGCTTGCCGGAGTGCACAGTGAATCTACAAATAATGTCCATACTGGTGTTCGTTTTGCCGGTTTTGATTATAATTCCTTAGCTAAACCGCAAGGAAAGAATAGTGTGGGTAATACATTACCCGGAACTTTAAGTCCCAAGGAAAACAGTGATTTTCAAGAGCAGTTAGCTGGAGTAACACCTCTTAGTCCTGGTTCACTTGCTGCCATTCTTGCTTCTAGATTTggttttcaagaaaatttagagaaatcaGCAGCTTTGTCTCCTTCTGCCTGTGAGCCTCTAGGACCCTGTATCTTAAACAATTGGCAGGATAGTTCAAACCCGCTGTTTGAAGTTTTAGGGGACAGTGAATTCGATGAAGTACCTGGAATTGGTAAGTGGAATGCCAACAAATTTCCTAAACCTCCAGAGCTTGATGGAGCTGGTTTCCAGCCTTATTCATCTGTGAAAAACCTGGACCCAAATGGATGGACATCATCATCAAATGGTGCAAACTTGACCCATCATCCTTACAATTTGTGTAGTTTTAGTAACGAGCTCTCATTGAGTCTCGCTACTTCTCCAAACACTGGTCAGTGCTCGGATGTGAGTTCTGATATGACCTATTGCTTGAATGGAACAAGGTCTGGTTTGAACCAAGCTTCTTCCGGCAGTAGAGAGTTTTGTATGAGTTTGGGTTCTAATAAACATGTACAGTTTTCACCAGCTATATTAGGTTCGAGATATCTTAATGGAATTCAAGAGATACTCGCTCAAATTGCCAGATATTCACTAGAAAATCCAgagcatataaatttttcgACTGCGGGAGTTATAGCAGAAGGAAGTATATCAAGCTCAGCTTTCCGACCCAAAGGGAGAACTGTAGTGATGGATCAAACTGCAAATTCTATGCTTGAACCTCATACGGAACCTACATTACAGAGAGATGCAACCGAACCAAAGAAAACCCAGCTTCTGACGCTTTTACAACTGGTTGATAGCCGATATAATCAGTGTTTGGATGAGATACATACTGTTGTATCCGCATTTCATGCTGCCACAGAGTTGGATCCTCATATACATGCACACTGTGCTCTTCAAACAATCTCCATCTTATACAAGGACTTGCGAGAGAAGATTAGCCATTATATTCTTGCCACTGGAGCAAATTTGAACAACTCATGCTCAGACGAGAAAGAAATGTATGCTGAAACTTCATTCATCCAGCAGTTGAAACGAAAAGATCATCAATTATGGAGGCCGCAGAGGGGTTTGCCTGAAAGATCTGTCTCTGTTCTACGGGCTTGGATGTTTCAGAACTTCCTCCATCCGTATCCGAAAGATGCAGAGAAGCATTTACTTGCAGTGAAAAGTGGGTTGACGAGAAGTCAGGTATCTAACTGGTTTATAAATGCTCGTGTTCGGCTATGGAAGCCAATGATCGAGGAAATGTATGCTGAAATGAACAAAAGCAAGGCatatcgaaacgaagaaggaatAGAGCGCAGACATAGGAGCCGGATAAGCATGAGCAATCAAAGATCTAGTATCAACTG 1694 0.4085 MSMENDMFSASVEMAGTNSSVINPQHPTPNPLVHCDPFDPNGQTRILNEISMLAGVHSESTNNVHTGVRFAGFDYNSLAKPQGKNSVGNTLPGTLSPKENSDFQEQLAGVTPLSPGSLAAILASRFGFQENLEKSAALSPSACEPLGPCILNNWQDSSNPLFEVLGDSEFDEVPGIGKWNANKFPKPPELDGAGFQPYSSVKNLDPNGWTSSSNGANLTHHPYNLCSFSNELSLSLATSPNTGQCSDVSSDMTYCLNGTRSGLNQASSGSREFCMSLGSNKHVQFSPAILGSRYLNGIQEILAQIARYSLENPEHINFSTAGVIAEGSISSSAFRPKGRTVVMDQTANSMLEPHTEPTLQRDATEPKKTQLLTLLQLVDSRYNQCLDEIHTVVSAFHAATELDPHIHAHCALQTISILYKDLREKISHYILATGANLNNSCSDEKEMYAETSFIQQLKRKDHQLWRPQRGLPERSVSVLRAWMFQNFLHPYPKDAEKHLLAVKSGLTRSQVSNWFINARVRLWKPMIEEMYAEMNKSKAYRNEEGIERRHRSRISMSNQRSSIN 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02223 564 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 18 560 - -
Bva06g02223 564 Gene3D - 468 560 - -
Bva06g02223 564 ProSiteProfiles 'Homeobox' domain profile. 462 525 IPR001356 GO:0003677
Bva06g02223 564 SMART prehox3 283 428 IPR006563 -
Bva06g02223 564 CDD homeodomain 465 526 IPR001356 GO:0003677
Bva06g02223 564 Pfam Associated with HOX 289 427 IPR006563 -
Bva06g02223 564 Pfam Homeobox KN domain 482 521 IPR008422 GO:0003677|GO:0006355
Bva06g02223 564 SUPERFAMILY Homeodomain-like 467 534 IPR009057 -
Bva06g02223 564 PANTHER HOMEOBOX PROTEIN ATH1 18 560 - -
Bva06g02223 564 MobiDBLite consensus disorder prediction 543 564 - -
Bva06g02223 564 SMART HOX_1 465 529 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02223 Bva-Chr6 14561117 14563882 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02223 230 538 Homeobox Transcription Factor Family AT4G32980 56.051 9.31e-105 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Bva06g02223 POX 1.5e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02223 - - gmx:100820354 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00575 10 5197775 5200769 Bva06g02223 06 14561117 14563882 BWGD
Bva06g02223 06 14561117 14563882 Bva06g02223 06 14561117 14563882 ECH