Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02201 ATGGGTTTTGCTGATATCTGTAATCTCGGTCTTGGTCTTGGTCTTGGTCTTGGTCTTGGTATTGGCCCCCAAAAGAATTGCATGAAGGCCGATCACCAAGAACTTAgtcagaagaagaagcaacaaGATCAGGATCCGCTGAAATGCAATACTGAAAATAAGTTGTATCCATCTCTTTCTTTAGGACCACCAGCTGATGATGAGGCATATCAATTAGCAGCAACAAAAGCTGAATCTGCTGATTTTCATGCACAAGCCTCTTCTGATCCAAGTgcagtttcttcattttcaaactCGTCTAGCATCAAGAGGGAGAGAGATCAGTTTGTGGGTGATGAAGCTGATCATGAACTTGAGGTCGAGAAGTTTCCTTCAAGGAATATTTCAGATTTAGATGAAGACGGAAATCCCAGAAAGAAACTTAGACTTACCAAAGAACAATCCGCACTTCTAGAGGACAGCTTCAAAGATCATTCAACTCTCAATCCGAAGCAAAAGCAAGAATTAGCTATGAAGCTGAAACTACGAGCTAGACAAGTAGAGGTGTGGTTTCAAAACAGGAGAGCCAGgACAAAGCTGAAGCAAACAGAAGTGGATTGTGAGTTACTTAAGAAGTGCTGCGAAACGCTGTCAGAAGAGAACAAGAGACTGCAAAAGGAACTACAAGAGCTGAAATCAATGAGAACAACGCCGGCACCCCTTTTTATGCAGCTTGCAGCAGCTACCCTCACCATATGCCCTTCTTGTGAGAGAATATGCAGTGGTGCCACCGCAGGGAACGGCAATGGTCCTTCCGCAACGGCGCCGTATTTTATTGGTTCAAGGGTCCATAACTTCCATGGAAGTAATTATTCCTTCACGCACTCATCTGCAGCTTGTTA 881 0.42 MGFADICNLGLGLGLGLGLGIGPQKNCMKADHQELSQKKKQQDQDPLKCNTENKLYPSLSLGPPADDEAYQLAATKAESADFHAQASSDPSAVSSFSNSSSIKRERDQFVGDEADHELEVEKFPSRNISDLDEDGNPRKKLRLTKEQSALLEDSFKDHSTLNPKQKQELAMKLKLRARQVEVWFQNRRARTKLKQTEVDCELLKKCCETLSEENKRLQKELQELKSMRTTPAPLFMQLAAATLTICPSCERICSGATAGNGNGPSATAPYFIGSRVHNFHGSNYSFTHSSAAC 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02201 293 SMART HOX_1 136 198 IPR001356 GO:0003677
Bva06g02201 293 PANTHER - 4 292 - -
Bva06g02201 293 SMART halz 194 237 IPR003106 GO:0006355|GO:0043565
Bva06g02201 293 MobiDBLite consensus disorder prediction 105 141 - -
Bva06g02201 293 ProSiteProfiles 'Homeobox' domain profile. 134 194 IPR001356 GO:0003677
Bva06g02201 293 Gene3D - 132 199 - -
Bva06g02201 293 Pfam Homeobox associated leucine zipper 194 227 IPR003106 GO:0006355|GO:0043565
Bva06g02201 293 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 4 292 - -
Bva06g02201 293 MobiDBLite consensus disorder prediction 31 47 - -
Bva06g02201 293 ProSitePatterns 'Homeobox' domain signature. 169 192 IPR017970 GO:0000981|GO:0006355
Bva06g02201 293 Coils Coil 200 230 - -
Bva06g02201 293 MobiDBLite consensus disorder prediction 81 104 - -
Bva06g02201 293 CDD homeodomain 137 195 IPR001356 GO:0003677
Bva06g02201 293 Pfam Homeodomain 138 192 IPR001356 GO:0003677
Bva06g02201 293 MobiDBLite consensus disorder prediction 29 141 - -
Bva06g02201 293 SUPERFAMILY Homeodomain-like 135 202 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02201 Bva-Chr6 14429972 14431474 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02201 1 293 Homeobox Transcription Factor Family AT2G22800 49.351 4.92e-68 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bva06g02201 Homeodomain 1.5e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02201 K09338 - gmx:100797650 313.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02201 06 14429972 14431474 Bva06g02201 06 14429972 14431474 ECH