Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02187 ATGGGTGGTCATGAAAATGCGATGGGTTTTCAACATGGAAACGATACCATTCTGAATTGTGCATCATCAGGTTTAAGCACAAATGTTTCAGAAATGGCAATTAGTTCCGTGTCCATGGCCAAGCCTTCAGACGCAGCTAATCCTTTTCTTGGTTCTTCTACTTGGGATCCACTTGTTTCATTCAATCAGAGTCAAACTTTAGGAGCCTCTTCAATGGTTTCTCATAATGAGTTTGCCAATTCATCTTACCCACTTCTGCTGGAAAATCAGGCAATGAGTAGCACCTCTCATCTTGTCCAATATATGTCCGACTCAAATTTCGGAGAGATGATTCCTAAGATTCCCTCATTTGAAGGCGGAAACTTCTCCGAAATGATTGGCTCCTTTGGTCAATCAGGGTGTAGTGATATGGTTAATACGGGGTATCGGCCAAGTTATAATCCAAACAAGGAGTCAGGCATCGAGAGGACTCAAATAAATGGTTCACATTCCCAGGGTGAGGACTCCCCTCCTGAACAAAGAGACACAGGATCTGCAAGTAAtggaaacagaagaaaaagagggcTTGATTATGATTCTTCCTTCAGTCCAAATAAGAATGCTGAAGAGGAAGGACGGAAAGATTCTTCTGGGAAAATCTCTGAAgttgtgaaagaaaaagatgaaaagaaaccaaagattGAGGAAAACTCTAGTGCAGGTTTGCGTAGCAAGCAATCAGGAAAGCAAGCTAAAGACAACACTCAAAGTGGGGAAGCtaccaaagaaaatttcattcatGTGAGAGCTCGAAGAGGTCAAGCTACAAACAGTCATAGCCTTGCAGAAAGGgtaagaagagaaaagatcaGCGAGCGGATGAGATTGCTTCAAGAACTTGTTCCAGGATGCAACAAGATAACTGGCAAGGCAGTGATGCTTGATGAGATCATCAATTATGTGCAGTCGCTGCAGCAACAAGTTGAGTTCCTGTCGATGAAACTTGCCACTGTGAACCCAGAACTGAATTTTGATGTTGAGCGGATTCTATCCAAGGACATTCTTCAGTCACGCATCGGAACTGGACCAATTACTGGATATGGTACTGGTATTAGTTTATCTCACCCTTTCCCTAGTGGAAGTTTTCAAGGACCCTTGCCCAGCTTGCCAGGCACATCACCGCAATTCCCACCTTTGCCTTCTCAGATTGTTTTGGACCACGAGTTCCAAAGTTTCTATGGAATGGGATACGATTCCAGTACAGCTGTTGACAATTTGGGACCCAATGGGCGATTGAAAACAGAGTTGTA 1289 0.4073 MGGHENAMGFQHGNDTILNCASSGLSTNVSEMAISSVSMAKPSDAANPFLGSSTWDPLVSFNQSQTLGASSMVSHNEFANSSYPLLLENQAMSSTSHLVQYMSDSNFGEMIPKIPSFEGGNFSEMIGSFGQSGCSDMVNTGYRPSYNPNKESGIERTQINGSHSQGEDSPPEQRDTGSASNGNRRKRGLDYDSSFSPNKNAEEEGRKDSSGKISEVVKEKDEKKPKIEENSSAGLRSKQSGKQAKDNTQSGEATKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFDVERILSKDILQSRIGTGPITGYGTGISLSHPFPSGSFQGPLPSLPGTSPQFPPLPSQIVLDHEFQSFYGMGYDSSTAVDNLGPNGRLKTEL 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02187 429 MobiDBLite consensus disorder prediction 179 231 - -
Bva06g02187 429 MobiDBLite consensus disorder prediction 232 255 - -
Bva06g02187 429 Gene3D - 264 338 IPR036638 GO:0046983
Bva06g02187 429 MobiDBLite consensus disorder prediction 140 178 - -
Bva06g02187 429 CDD bHLH_AtBPE_like 257 342 - -
Bva06g02187 429 Pfam Helix-loop-helix DNA-binding domain 270 318 IPR011598 GO:0046983
Bva06g02187 429 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 265 335 IPR036638 GO:0046983
Bva06g02187 429 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 267 317 IPR011598 GO:0046983
Bva06g02187 429 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 11 429 IPR024097 GO:0006355
Bva06g02187 429 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 11 429 - -
Bva06g02187 429 SMART finulus 273 323 IPR011598 GO:0046983
Bva06g02187 429 MobiDBLite consensus disorder prediction 140 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02187 Bva-Chr6 14359137 14362618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02187 1 429 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 42.237 2.62e-81 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva06g02187 HLH 4.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02187 - - gmx:100801930 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02187 06 14359137 14362618 Bva06g02187 06 14359137 14362618 ECH