Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02170 ATGGTGGCGGAGAAAGCCACGCACTTATCAGACATTGAGGACGAGGATGATCTCGACGAAGAACCAGGGGAAGTTATTGAATCGGCACCGCCCCAAGAGGTTGGCGAAGAGAGGGAGCTCAATGCCTTCGGTTTCAAAAAGAAACTTCTCAAGCGCGGACGTGGATGCGAGACCCCAGAGTTCAATGACGAAGTAACCGTTCACTATGTTGGAACGTTGCTTGATGGAACCAAGTTCGATTCCACTAGAGATACAGATGAACCTGTAACGTTTACGCTTGGTAAAGCTCAAGTGGTTGCTGGGTTGGATCACGGGATTGTCAGCATGAAAAAGGGAGAGGTCGCATTGTTCACATTACCTGCGGATTCAGGCTATAAAGTTGGAGGTTCTGGTGGCATTCCACCTAACTCGATTACACAGTTTGAGGTTGAACTTATTTCTTGGATCACAGTGGTGGATATTTGCAAAGATGGtggaattttgaagaaaataatggaGAAGGGGAACAGGAATGAGCTACCCAGTGATTTAGATGAAGTGCTTGTGAAGTACCAGGCCACACTAGTTGATGGCACCATTGTTGCAGAAACCCCAGAAGGAGGGGTTGAATTTTGTGTGAAAGATGGTCAACTTTTTCCAGGATTTCCTAAAGTAATCATGAGTATGAGAAGGGGAGAGAAGGctaaattaattgttcaacCTCAGTATGTTGTTGGGGAGAAGGGAACAGAAGCCTGCAGTGGTTTCTTATCAGTCCTGCCAAATTCAGTGCTGCGTGTTGATATTGAACTTGTGTCCTTCAAGCCGGTTATAGATGTTACTGGTGACTCGAAGGTgcttaaaaagattttgaaagaaGGGGAGGGAGCCATTGCTAATGAGGGTGCAACTGTTAATATTAGCTATAGAGCTATGCTTGAAGATGGCACCATACTTGAGAAAAAGGGAATTGATGAAATACAGCCTTTGGAATTCATAACAGATGAAGAACAAGTAATTACTGGCTTAGACAGAGCAGTGGCGACGATGAAGAAGGGCGAGAGGgctataataaatatacatcCTAATTATGCATTTGGAAATGTTGAAGAAAGACGTGATTTTGCGACGGTTCCACCAGGATCCTATGTAGTCTATGAAGTTGAGATGATCGACTTTATTAAGgaaaaagcacCATGGGAATTGAGTAACAATGAGAAAATTGAGGTTGCtgggaggaagaaagaagaaggcaacatattatttaaaaacgGCAAGTATCAGCGAGCTGGGAAGAAGTATGACAAGGCTGCTGATTATGTTAGTGAAGATGGATCCTTCGGGGACAATGAGCAAAAGCTAGCTGAGGCATTAAGGGTGTCATGCTGGTTGAATGGTGCAGCATGTAGCCTCAAACTTAATGACTTTCTAGGAGCAATTAAGATGTGTTCGCAGGTTCTGGATATTGAGTCGGTAAATGTGAAAGCTTTGTATAGACGAGCGCAGGCATATATAGAAACGGGGGATCTTCTCTTGGCTGATGCTGACGTCAAGAAAGCTCTTGAGGCTGACCCACAGAACAGgGAGGTAATGATGATGCAAAGGAAATTGAAGCAACTTCAAGCTGAGAGTGATAGAAGAGACGCCAAGCTGTATACAAATATGTTTGCGAATAAAACAAAGGATATATCTGTGGCAACAAAGAGGTTGAGGGTTGAGAAAACAGAGGATGAGCGGAAAGATGACCAGGTCGTGGGAATGGACGGAAATGGAGAACGCTGCTG 1763 0.4169 MVAEKATHLSDIEDEDDLDEEPGEVIESAPPQEVGEERELNAFGFKKKLLKRGRGCETPEFNDEVTVHYVGTLLDGTKFDSTRDTDEPVTFTLGKAQVVAGLDHGIVSMKKGEVALFTLPADSGYKVGGSGGIPPNSITQFEVELISWITVVDICKDGGILKKIMEKGNRNELPSDLDEVLVKYQATLVDGTIVAETPEGGVEFCVKDGQLFPGFPKVIMSMRRGEKAKLIVQPQYVVGEKGTEACSGFLSVLPNSVLRVDIELVSFKPVIDVTGDSKVLKKILKEGEGAIANEGATVNISYRAMLEDGTILEKKGIDEIQPLEFITDEEQVITGLDRAVATMKKGERAIINIHPNYAFGNVEERRDFATVPPGSYVVYEVEMIDFIKEKAPWELSNNEKIEVAGRKKEEGNILFKNGKYQRAGKKYDKAADYVSEDGSFGDNEQKLAEALRVSCWLNGAACSLKLNDFLGAIKMCSQVLDIESVNVKALYRRAQAYIETGDLLLADADVKKALEADPQNREVMMMQRKLKQLQAESDRRDAKLYTNMFANKTKDISVATKRLRVEKTEDERKDDQVVGMDGNGERC 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02170 587 SUPERFAMILY TPR-like 399 549 IPR011990 GO:0005515
Bva06g02170 587 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 174 265 IPR001179 GO:0003755
Bva06g02170 587 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 291 384 IPR001179 GO:0003755
Bva06g02170 587 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 58 146 IPR001179 GO:0003755
Bva06g02170 587 Gene3D Tetratricopeptide repeat domain 392 547 IPR011990 GO:0005515
Bva06g02170 587 SUPERFAMILY FKBP-like 153 268 - -
Bva06g02170 587 MobiDBLite consensus disorder prediction 1 37 - -
Bva06g02170 587 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 62 149 IPR001179 GO:0003755
Bva06g02170 587 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 295 387 IPR001179 GO:0003755
Bva06g02170 587 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 8 272 - -
Bva06g02170 587 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 383 570 - -
Bva06g02170 587 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 270 386 - -
Bva06g02170 587 PANTHER PEPTIDYLPROLYL ISOMERASE 8 272 - -
Bva06g02170 587 PANTHER PEPTIDYLPROLYL ISOMERASE 383 570 - -
Bva06g02170 587 MobiDBLite consensus disorder prediction 567 587 - -
Bva06g02170 587 PANTHER PEPTIDYLPROLYL ISOMERASE 270 386 - -
Bva06g02170 587 SUPERFAMILY FKBP-like 273 404 - -
Bva06g02170 587 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 177 268 IPR001179 GO:0003755
Bva06g02170 587 SUPERFAMILY FKBP-like 44 150 - -
Bva06g02170 587 Gene3D - 151 267 IPR046357 GO:0003755
Bva06g02170 587 Gene3D - 268 391 IPR046357 GO:0003755
Bva06g02170 587 Gene3D - 36 150 IPR046357 GO:0003755
Bva06g02170 587 ProSiteProfiles TPR repeat profile. 487 520 IPR019734 GO:0005515
Bva06g02170 587 SMART tpr_5 404 437 IPR019734 GO:0005515
Bva06g02170 587 SMART tpr_5 487 520 IPR019734 GO:0005515
Bva06g02170 587 SMART tpr_5 453 486 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02170 Bva-Chr6 14254705 14259983 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02170 34 550 Calmodulin-binding Proteins AT3G25230 55.192 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02170 K09571 - qsu:111990603 812.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02170 06 14254705 14259983 Bva06g02170 06 14254705 14259983 ECH