Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02163 ATGACACCCAAAGAAGACGACCCAAACCTTGTGAAGCTCGAGTCAGCATGTTCTGACTTGAAAGCCCTCCTTCAAGCTTcggagaaaatgaaggaaaagctGGGAAATATGGAGACAAGGTTTGATCTTCTTGAGGGAAATCTTTCAATAACATCTAGAAGAGTGGCTCCTATACAGTCTCTGGCCATGTCCACGAAAGCCCTTGATACCAGAATTAATAGAGCTCTTTCTCCTGCTCTCGCACTCCTTGACAGCTTCAAGCTCTGTGAGTCTCACCAACACAAGCTCGCCGACCTCTCATCCAAGTTATCTGCAGAGAAGACACCAGAAAAAAGGATGATGAAGTTGTTCGATTACATGGATTGTGTCGATGAGCTTAATCAGGCCATTGATTCTGTAAGTAAAGAGGGTGAACCTGTGATTCAGAAGCTCCAAGAGGTGGTAAAGTTTATAAGTCGAACCAATGCAGCGGATCAACACAAGACAGAAAGGTTAAGAGAGAGCCTTATCTCTCTCAAGGCGCTCTACGAAACAGAGGTGGATGCCATGAGGTTTGATGGTTTGCTAGATGCAGCTCTGCTCCATCTGCAGGACGAGTTTGAGACTATATTACAGAACTTGAGGCAACAAAACATGAGAACTCTGTCAGAAAACCAGGCTGACCATGATACAGACTACGATCCTTTTGACTCTGGCTTGGGCTCAGAGCAGGAAGTTTCAGCGTTGAGACGAATTACAGAGACCCTTGCTGCCAATGATTGTTTGGACTTATGTATTGACATCTACGTCAAGGTGAGATATAGAAGGGCTGCCAAAGCGCTTATGAGGTTGAACCCAGATTACTTGAGAACACATACCCCAGAAGGAATCGATGAAATGGAGTGGGAAACCTTGGAGACAGCAATAACCCTTTGGATTCAACACTTTGAGGTTGCTGTAAAGAAAGTTCTTTTCTCAGAAAAGAAGCTTTGCAACCAAGTTTTGGGTACAGTTATGGAAGGGCTAGTCTGGCCAGAATGCTTCATCAAAATATCTGATAAAATCATCGCGGTCTTCCTTCGATTCGGAGAAGGTGTTGCTAGAAGCAGCAAAGAGCCGCAAAAGTTGTTCAAGCTGTTGGACATGTTTGAATCcatgaaaaaattcaaacttgaatTCTCAGAAATTTTTGACGGCGAAGCCGGAGTAGATATCTGCACACGGTTCCGGGAGCTCGAAAAGCTACTAATTGATTCCTCCAGCAAAGTATTCTGGGAGTTTGGCCTGGAAATAGAAGGGAACTCCGGTGGGTTTCCACCTCCACAAGATGGTTCCGTTCCAAAACTCGTAAGATACGCCATTTATTACCTCAAGTATCTAGCTAAGGACAATTACAGAGCAGCCATGGCTGAAGTTCTCCGAACAGAACAAATATGGAAAACAGGGATATTATCGAAACCCAACAGAGACGAGGATTTACTCAAGGATGCCATTTCCAACGTCATGGAAGCCCTTCAGAGAAACATTGAGTCTAAACGCAGCCGTTGCAGGGACAAAATTTTGACCCATATATTTGGAATGAATACATACTGGTACATCTACAAGAGGACGAAAAACACAGAGCTCTTTGGGCTATTGGGTGAGCACTATATGAAAGACAAATACAAGGCAGTGGCAGAGGAATCGGCTTATATGTATCAGAAGTACGCGTGGGGGGTTCTGGTGAGGATTTTGGATGTGGAGGATTTGAACGAACAGGGGAAGGAAACCATTGGAAGTGTAGTGACAGAAAAGATGGAAAATTACTTGAAGTGTTTGGATGAAATCTCGCAGATGCATGGAGGGTATTACAGTATACAAGATGCGGATTTAAGAGAACAGATCAAAGAAGCGACTTTGAAACTTGTGGTGCCGGCTTACGCAGAGTTCTTGGAATCCTACTCAGGACTGTTGAAGAGGAAATTGTACCCGAGCCCTCAAAGGTTGCAGGGGTTAGTGAGTCAGGTTTTCGACGGCGGCGATGCCAAGTTGAGCACCGGAGTTCGTACGGTGGTAAGTTTGCCCGTACCTCAGCGTCTACCGAAGGGTGAGACCAATGACTTTCGACGATCCAGATCAGACACGAGCGATATTTA 2114 0.4418 MTPKEDDPNLVKLESACSDLKALLQASEKMKEKLGNMETRFDLLEGNLSITSRRVAPIQSLAMSTKALDTRINRALSPALALLDSFKLCESHQHKLADLSSKLSAEKTPEKRMMKLFDYMDCVDELNQAIDSVSKEGEPVIQKLQEVVKFISRTNAADQHKTERLRESLISLKALYETEVDAMRFDGLLDAALLHLQDEFETILQNLRQQNMRTLSENQADHDTDYDPFDSGLGSEQEVSALRRITETLAANDCLDLCIDIYVKVRYRRAAKALMRLNPDYLRTHTPEGIDEMEWETLETAITLWIQHFEVAVKKVLFSEKKLCNQVLGTVMEGLVWPECFIKISDKIIAVFLRFGEGVARSSKEPQKLFKLLDMFESMKKFKLEFSEIFDGEAGVDICTRFRELEKLLIDSSSKVFWEFGLEIEGNSGGFPPPQDGSVPKLVRYAIYYLKYLAKDNYRAAMAEVLRTEQIWKTGILSKPNRDEDLLKDAISNVMEALQRNIESKRSRCRDKILTHIFGMNTYWYIYKRTKNTELFGLLGEHYMKDKYKAVAEESAYMYQKYAWGVLVRILDVEDLNEQGKETIGSVVTEKMENYLKCLDEISQMHGGYYSIQDADLREQIKEATLKLVVPAYAEFLESYSGLLKRKLYPSPQRLQGLVSQVFDGGDAKLSTGVRTVVSLPVPQRLPKGETNDFRRSRSDTSDI 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02163 704 SUPERFAMILY Cullin repeat-like 113 664 IPR016159 -
Bva06g02163 704 Gene3D Exocyst complex component Exo70 157 670 - -
Bva06g02163 704 MobiDBLite consensus disorder prediction 689 704 - -
Bva06g02163 704 Coils Coil 488 508 - -
Bva06g02163 704 Coils Coil 10 40 - -
Bva06g02163 704 MobiDBLite consensus disorder prediction 682 704 - -
Bva06g02163 704 PANTHER EXOCYST COMPLEX PROTEIN EXO70 7 665 IPR004140 GO:0000145|GO:0006887
Bva06g02163 704 Pfam Exo70 exocyst complex subunit 305 646 IPR046364 GO:0000145|GO:0005546|GO:0006887
Bva06g02163 704 PANTHER OS08G0519900 PROTEIN 7 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02163 Bva-Chr6 14222326 14224928 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02163 7 646 EXO70 exocyst subunit family AT4G31540 29.618 3.60e-78 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02163 - - aip:107605596 926.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02163 06 14222326 14224928 Bva06g02163 06 14222326 14224928 ECH