Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02157 ATGTTGTGCGCTTGCTCTGGGGAGCAATTCAAATTTGAGGAGCCGCCACAGTCACCGGAGTCTCTCGCAACAAGGGATTTCTCTGCCAGCGGGCTTTCTTCAAGAACAGGGGATTGGGAATCAAAATTTGAGGATACCCAAGTAGATGAAGTTGAATCCTCTCTAAAAGAAGCTCTCTCCTTGAACTACGAGGAAGCTAGGGCTTTGTTGGGGAGGCTTGAATACCAAAGAGGGAACTTCGATGCTGCCCTTCAAGTATTTCAGGGAATCGACATTAGGGGTTTGACCCCAAGGATGATCAGGGCTATTTCTGAGAGAACCAAGCAAAGAAAACCACGTTCTAAGGGTGATAATGTGCCTCTGAATGTGATGTCAATGCATTCAGTGAGCCTGCTTCTTGAGGCAATTTTGCTTAAATCAAAATCGCTAGAGGAACTGGGGCGATGCATAGAGGCTGCTAAAGAATGCAGAATAATTCTGGATACGGTTGAATCTGCCCTCCCTAATGGAATGACTGAGGTTATCGGTGGAGATTGTAAGTTGCAGGAGATGTTCCAAAAAGCGTTGGAGTTGCTCCCAAATCTATGGACTAAGGCAGGGTATCTAGATGAAGCTGTCACAGCTTATAGGCGGGCTTTAGTGAAGCCATGGAATTTGGAGCCAAGAAGGTTGGCTGCTGTGCAAAAAGATTTAGCCTCCACTCTACTCTACGGCGGTGTTGAAGTAAGCCTTCCCCCTCAGTTGCAGATGTGGGGCCCAACAACACCCAAAAGTAATATTGAAGAAGCAAtacttttgttattaataCTCATGAGAAAAGTAGCTGTTCAGGAAATAGACTGGGATGCTGAAATATTGGATCATCTTACATTTGCACTTTCAGTTACTGGGATGTTTGAACTGTTGGCAGATCATGTGGAGCAGATACTTGCTGGTATTTATAATCGAGTTGACAGGTGGTACTTTCTGGCTCTTTGCTATAGCGCAGCAGGACAAAATGAAGCAGCATTGAACCTTTTAAGGAAGGGATGTGGTAGTTCTGAAGCAAAGCATGCACCACATTTTccatcttttttgtttggtgcAAAATTGTGTTCCCAAGATCCGAACCATGCTCGAGAAGGGATTAATTTTTCACGTAAAGTCATTGATATAGCCAAGCATCAAAATGATCATTTTTTGAGTCATGGCCACAAATTTCTTGGTGTTTGCTATGGGGCTGCAGCTAGAATTTCTGTACTGGATTCTGAGAGGATTGTGTTTCAAAGGGAATCTTTGAATTCTCTTAACCAAGCTGCTGTAAACGGAAGTGATGGTGGTGATGCAGAAGTGATATTCAGCCTTGGTTCGGAAAATGCAATTCAAAGGAATCTCGATGCAGCTTATGACAATGCAATCTTGTACTCGGAAATGACTGTTGGCGGCTCACGGAGAGGTTGGGAGTTGTTAGCGCTTATAGTTTCTGCACAGCAGCGGTTTAAGGATGCTGAAACAATTGTTGATTTTGCTTTAGATGAGGTTGACAGGATAGATCAGTTACAACTTCTAAGGTTGAAAGCGGTGCTTAAAATTGCTCAGCAGCAACCCAAGCAAGCAATAGAGACCTACAGAATCTTACTGACATTAATTCAAGCGCACAAGGAGTTATGGCTTCAAGCTAAGAACTCTGATCAAGCAAGCACGTTCAGGCAAGAGGCATTAATAGAAAGGAACCTGGAAATGGAAGCCTGGCAGGATTTGGCTACCATTTATGCGGATCTTGGTTCCTGGCTTGATGCAAAAACTTGTGTGGACAAAGCTCAGTTGATAGAATCTTTTTCTCCTAGGAGTTGGCATGTTACAGGGACAATATTTGAAGCTCAGTCATTATACAAGGAGGCCTTTGTTTCCTTCTCAGTTTCATTGTCAATAGAACCAGATTACATTCCAAGTATCATTTCAACTGCCGAGTTGTTGTTGAAGCAAGGCACGCAGTCGCTCCCAATTGCGAGAAGCTTTTTACTGAATGCTTTGCGATTAGAACCCACGAATCATGATGCATGGTTCAACCTTGGATTGGTTTCCAAAATGGAAGGTTCATTACAACAAGCGGCAGATTTCTTTCAAGCCGCGTATGAGCTAAAGCTCTCAGCTCCAGTGCAAAGATTTGTTTG 2153 0.4301 MLCACSGEQFKFEEPPQSPESLATRDFSASGLSSRTGDWESKFEDTQVDEVESSLKEALSLNYEEARALLGRLEYQRGNFDAALQVFQGIDIRGLTPRMIRAISERTKQRKPRSKGDNVPLNVMSMHSVSLLLEAILLKSKSLEELGRCIEAAKECRIILDTVESALPNGMTEVIGGDCKLQEMFQKALELLPNLWTKAGYLDEAVTAYRRALVKPWNLEPRRLAAVQKDLASTLLYGGVEVSLPPQLQMWGPTTPKSNIEEAILLLLILMRKVAVQEIDWDAEILDHLTFALSVTGMFELLADHVEQILAGIYNRVDRWYFLALCYSAAGQNEAALNLLRKGCGSSEAKHAPHFPSFLFGAKLCSQDPNHAREGINFSRKVIDIAKHQNDHFLSHGHKFLGVCYGAAARISVLDSERIVFQRESLNSLNQAAVNGSDGGDAEVIFSLGSENAIQRNLDAAYDNAILYSEMTVGGSRRGWELLALIVSAQQRFKDAETIVDFALDEVDRIDQLQLLRLKAVLKIAQQQPKQAIETYRILLTLIQAHKELWLQAKNSDQASTFRQEALIERNLEMEAWQDLATIYADLGSWLDAKTCVDKAQLIESFSPRSWHVTGTIFEAQSLYKEAFVSFSVSLSIEPDYIPSIISTAELLLKQGTQSLPIARSFLLNALRLEPTNHDAWFNLGLVSKMEGSLQQAADFFQAAYELKLSAPVQRFV 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02157 717 Pfam Tetratricopeptide repeat 668 706 - -
Bva06g02157 717 Gene3D Tetratricopeptide repeat domain 32 466 IPR011990 GO:0005515
Bva06g02157 717 ProSiteProfiles TPR repeat profile. 678 711 IPR019734 GO:0005515
Bva06g02157 717 SUPERFAMILY TPR-like 47 342 IPR011990 GO:0005515
Bva06g02157 717 Coils Coil 56 76 - -
Bva06g02157 717 ProSiteProfiles TPR repeat profile. 608 641 IPR019734 GO:0005515
Bva06g02157 717 Gene3D Tetratricopeptide repeat domain 660 713 IPR011990 GO:0005515
Bva06g02157 717 PANTHER PROTEIN NPG1 1 717 IPR043376 -
Bva06g02157 717 PANTHER PROTEIN NPGR1 1 717 - -
Bva06g02157 717 SUPERFAMILY TPR-like 194 601 IPR011990 GO:0005515
Bva06g02157 717 Gene3D Tetratricopeptide repeat domain 482 659 IPR011990 GO:0005515
Bva06g02157 717 MobiDBLite consensus disorder prediction 6 39 - -
Bva06g02157 717 MobiDBLite consensus disorder prediction 21 37 - -
Bva06g02157 717 SUPERFAMILY TPR-like 551 708 IPR011990 GO:0005515
Bva06g02157 717 SMART tpr_5 574 607 IPR019734 GO:0005515
Bva06g02157 717 SMART tpr_5 317 350 IPR019734 GO:0005515
Bva06g02157 717 SMART tpr_5 678 711 IPR019734 GO:0005515
Bva06g02157 717 SMART tpr_5 608 641 IPR019734 GO:0005515
Bva06g02157 717 SMART tpr_5 513 546 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02157 Bva-Chr6 14203231 14207046 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02157 1 717 Calmodulin-binding Proteins AT1G27460 59.944 0.0 879
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02157 K21843 - gmx:100799251 1152.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02157 06 14203231 14207046 Bva06g02157 06 14203231 14207046 ECH