Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02154 ATGGATGAGGATGATTGTGTATCCAGCCTTCTATgccatgaaaatgaaactttcTTGGGAGATGAAGATTCATTCATTCACTTAAGGGATTGTAGTAGTCCAGAGGATGAGTATGTGAACATTTTGATTGAGAGAGAGATTGATCTTGGGTTCAAAAAAGATGAATCTTTGGTGTTTGGGAACTGGATCAAACGTGCCCGCTTGGACGCTATCAATTGGATTCTCAAAAAAAGAGCAACATTCGGTTTTCGATTTCAAACAGCTCATTTGTCTGTCACATACTTGGATCGATTTCTTTCCAGGCGATCCATTGATAAAGATAAGTATTGGGCTATCCGGTTTCTGTCAGTTGCATGTCTTTCTATAGCTGCAAAGATGGAGGAGTGCAATGTTCCGCCATTATCAGAGTTTCAACTAGACGACGACTACAGCTTCGAGAGCAAAGTGATTCAGAGAATGGAGCTTTTGGTGCTCAGCACATTGGAATGGAAAATGAGCTTTACAACTCCCTTTGTCTTCCTTCCTTATTTCATCACCAAGTTCTGCAACGAATCCCCGGCGGCGCCAACCCATATTTTGTCCAGAACAGTGCAAGTCATTTCCACTATAATCAAAGAGGTCAATTTAATGGATCACAGACCATCTGTCATCGCCGCCGCAGCTACTTTGATGGCATTGGATCcgaaattaacaagaaaagcaCTAGAGTTGAAGATGAGTTCAGTTTctcaatataaatttcttcaaaCTGAAGAAATATTAGCGTCCTACAATCTAATGCAGAGACTATACGTGGACAAAACTAGAGGAGACAAGCTTGAACATTCCAAGAACCCTTCACCTTCACATACCCAATCAAGGGCAATTGACTTGCTAGAGAGTTCTTCAGTTACATCTGCTGCTACGACTAAGAGAGGAAGGCTTGCATTCAATGATCACAAAGAAAGTCATGGCACTCCAGAAGGGCAGGGACTCTG 977 0.4002 MDEDDCVSSLLCHENETFLGDEDSFIHLRDCSSPEDEYVNILIEREIDLGFKKDESLVFGNWIKRARLDAINWILKKRATFGFRFQTAHLSVTYLDRFLSRRSIDKDKYWAIRFLSVACLSIAAKMEECNVPPLSEFQLDDDYSFESKVIQRMELLVLSTLEWKMSFTTPFVFLPYFITKFCNESPAAPTHILSRTVQVISTIIKEVNLMDHRPSVIAAAATLMALDPKLTRKALELKMSSVSQYKFLQTEEILASYNLMQRLYVDKTRGDKLEHSKNPSPSHTQSRAIDLLESSSVTSAATTKRGRLAFNDHKESHGTPEGQGL 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02154 325 Pfam Cyclin, N-terminal domain 65 166 IPR006671 -
Bva06g02154 325 Gene3D - 65 166 - -
Bva06g02154 325 PANTHER CYCLIN-D5-1 38 305 - -
Bva06g02154 325 CDD CYCLIN 67 158 IPR013763 -
Bva06g02154 325 Gene3D - 167 245 - -
Bva06g02154 325 PANTHER CYCLINS 38 305 IPR039361 -
Bva06g02154 325 SMART Cyclin_C_2 168 300 IPR004367 -
Bva06g02154 325 SUPERFAMILY Cyclin-like 29 165 IPR036915 -
Bva06g02154 325 MobiDBLite consensus disorder prediction 270 325 - -
Bva06g02154 325 MobiDBLite consensus disorder prediction 279 305 - -
Bva06g02154 325 SMART cyclin_7 72 159 IPR013763 -
Bva06g02154 325 ProSitePatterns Cyclins signature. 67 98 IPR006671 -
Bva06g02154 325 Pfam Cyclin, C-terminal domain 169 280 IPR004367 -
Bva06g02154 325 SUPERFAMILY Cyclin-like 151 243 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02154 Bva-Chr6 14183855 14185361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02154 5 245 Core Cell Cycle Gene Families AT4G37630 38.132 1.70e-46 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02154 K18811 - gmx:100798728 374.015