Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02153 ATGGAGAGCTACCTGAATGAGAATTTCGGAGATGTGAAACCAAAGAACTCCTCGGAGGAGGCGCTTCAGAGATGGAGACAGCTCTGTTGGCTTGTGAAGAATCGTAAAAGGAGGTTTCGCTTCACTGCTAATCTTTCTAAGCGATTTGAAGCTGAGGCTATCAGACGCTCCAATCAGGAGAAGTTCAGAGTTGCAGTGTTGGTCTCCCAAGCTGCCCTTCAGTTTATACAGGGTCTAAATTTGTTAAGTGAATACACTGTACCAGAGGAGGTTAGAGCTGcaggttttgaaatttgtgcCGATGAGTTGGGATCAATTGTTGAAGGCCGTGATGTGAAGAAGTTGAAAATTCATGGTGGGGTTGAGGCTTGCGTATGTGGGAAGGTTAAGGAAATAGGGAGCTCTAAGGTCTCTTCTGATTTCTTATCTGATCTTCCGGATTTTGCTCTTAGAGTTCTACTCCAGTCAATATTTAACAACACTGGAGGAGAAGTTGTCAGAAACAAGGATGAGAATATTGAAATCCTGGGAACACCAACTGAAACTGCTATCTTGGAATTTGGTCTATCACTTGGGGGTAATTTCCAGGAAGAACGACTAGCCTCGAAAATTGTGCAAGTTGAACCCTTCAATTCTTTTAAGAAGCACATGGGGGTGGTTCTACAGCTTCCAGATGGTAGCTTCAGGGCACACTGCAAAGGCGCCTCTGAAATAATTCTAGCTGCATGTGACAAAGTTATAGACTCAAATGGTGAGGTTGTTCCCCTTCATGAAGAATCCAtcaatcatttgaaaaatacaattgaaaattttgcgAGTGAAGCTCTCCGTACACTTTGCCTTGCTTACATGGAGATTGGAAGCGAATACTCTGTTGAAAGTCCTATTCCCAGCACGGGTTATACTTGTATAGGAATTGTAGGTATTAAAGATCCAGTTCGTCCTGGTGTACGAGAGTCTGTTGCCATTTGTAGGTCTGCAGGTATTACTGTTAGAATGGTTACTGGAGACAATATAAGTACTGCAAAGGCAATTGCTAGGGAATGTGGAATTCTGACCGATGGTATAGCAATTGAAGGCCCTGAGTTCCGTGAGAAGAGTGAGGAGGAATTGCATGATATAATTCCAAAAATTCAGGTGATGGCTCGATCTGCACCAATGGATAAGCATACACTCGTGAAACACTTGAGGACAACATTTGGAGACGTTGTCGCAGTCACTGGTGATGGTACGAATGACGCCCCAGCACTTCACGAAGCGGATATTGGACTTGCAATGGGCATTGCTGGAACTGAGGTAGCAAAAGAAAGTGCTGACGTGATAATATTAGACGATAATTTTTCCACTATTGTAACTGTGGCCAAATGGGGCCGTTCAgtatacataaatatacaaaaattcgTACAATTCCAACTTACAGTGAATATTGTTGCTCTGATTGTTAACTTCTCTTCTGCCTGTTTAACAGGAAATGCTCCCCTCACGGCAGTTCAGCTTCTATGGGTCAACATGATCATGGACACTCTAGGAGCACTTGCACTAGCCACTGAACCACCGAAAGATGACTTAATGAAAAGACCACCTGTTGGTAGGAAAGGAAACTTCGTCAGTAATGTGATGTGGAGGAATATCTTGGGGCAGGCTTTGTATCAATTTGTCATAATCTGGTTCCTTCAGACTAGGGGAAAAGTAGCTTTCCATCTTGATGACCCTGATTCTGATTTGGTTTTGAACACGCTGATTTTCAACTCATTCGTATTCTGTCAGGTTTTCAATGAGATCAGTTCCAGAGAGATGGAAAGGATAAATGTTTTGGAAGGCATACTGAAGAACTATGTGTTTGTGGCTGTCCTCACTTGTACCATCCTCTTCCAAATCATAATTATTGAATTCTTGGGCACGTATGCAAATACATGCCCCCTCAGTTTGAAGCAGTGGATTGTTAGTGTTTTCCTTGGATTCCTCGGCATGCCAGTCGCAGCAGCTTTAAAGTTGATCCCTTTCGAGTGTTCGTGGGTAGCCATTATGGGGTCAACAGAATA 2042 0.4192 MESYLNENFGDVKPKNSSEEALQRWRQLCWLVKNRKRRFRFTANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIQGLNLLSEYTVPEEVRAAGFEICADELGSIVEGRDVKKLKIHGGVEACVCGKVKEIGSSKVSSDFLSDLPDFALRVLLQSIFNNTGGEVVRNKDENIEILGTPTETAILEFGLSLGGNFQEERLASKIVQVEPFNSFKKHMGVVLQLPDGSFRAHCKGASEIILAACDKVIDSNGEVVPLHEESINHLKNTIENFASEALRTLCLAYMEIGSEYSVESPIPSTGYTCIGIVGIKDPVRPGVRESVAICRSAGITVRMVTGDNISTAKAIARECGILTDGIAIEGPEFREKSEEELHDIIPKIQVMARSAPMDKHTLVKHLRTTFGDVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNIVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPKDDLMKRPPVGRKGNFVSNVMWRNILGQALYQFVIIWFLQTRGKVAFHLDDPDSDLVLNTLIFNSFVFCQVFNEISSREMERINVLEGILKNYVFVAVLTCTILFQIIIIEFLGTYANTCPLSLKQWIVSVFLGFLGMPVAAALKLIPFECSWVAIMGSTE 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02153 680 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 376 488 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva06g02153 680 Gene3D - 424 671 - -
Bva06g02153 680 Gene3D - 17 77 - -
Bva06g02153 680 PANTHER CATION TRANSPORTING ATPASE 3 122 - -
Bva06g02153 680 PANTHER CATION TRANSPORTING ATPASE 121 668 - -
Bva06g02153 680 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 152 669 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Bva06g02153 680 Pfam Cation transporting ATPase, C-terminus 492 666 IPR006068 -
Bva06g02153 680 PANTHER CALCIUM-TRANSPORTING ATPASE 3 122 - -
Bva06g02153 680 PANTHER CALCIUM-TRANSPORTING ATPASE 121 668 - -
Bva06g02153 680 Pfam haloacid dehalogenase-like hydrolase 304 421 - -
Bva06g02153 680 SUPERFAMILY HAD-like 265 512 IPR036412 -
Bva06g02153 680 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 49 IPR024750 GO:0005516
Bva06g02153 680 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 137 317 IPR023299 GO:0000166
Bva06g02153 680 PRINTS P-type cation-transporting ATPase superfamily signature 407 426 - -
Bva06g02153 680 PRINTS P-type cation-transporting ATPase superfamily signature 305 316 - -
Bva06g02153 680 PRINTS P-type cation-transporting ATPase superfamily signature 99 113 - -
Bva06g02153 680 PRINTS P-type cation-transporting ATPase superfamily signature 327 337 - -
Bva06g02153 680 PRINTS P-type cation-transporting ATPase superfamily signature 431 443 - -
Bva06g02153 680 PRINTS H+-transporting ATPase (proton pump) signature 407 423 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva06g02153 680 PRINTS H+-transporting ATPase (proton pump) signature 439 464 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva06g02153 680 PRINTS H+-transporting ATPase (proton pump) signature 264 282 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva06g02153 680 Gene3D - 121 311 IPR023299 GO:0000166
Bva06g02153 680 Gene3D - 312 423 IPR023214 -
Bva06g02153 680 Pfam Cation transport ATPase (P-type) 168 246 - -
Bva06g02153 680 SUPERFAMILY Calcium ATPase, transmembrane domain M 457 668 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02153 Bva-Chr6 14176209 14181835 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02153 90 667 Primary Pumps ATPases AT1G27770 76.166 0.0 911
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02153 K01537 - gmx:100810758 943.725