Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02150 ATGGAGATCAGACTGCTGGCCAAGAACAAACCAGAATATCGCTTAAAAATCGCCAAGGCTGGCGCAATCAAGCCGTTAATTTCGCATATGTCTTCGCCCGATCTTCAGTTACAAGAGAACGCCGTTACATCGATTTTGAACCTTTCGCTGTGCGACGAGAATAAAGAGCTCATAGCTTCATCGGGAGCCATTAAGCCTCTGGTTCGACTCCTCGAAACAGGGACATCAACGGCTAAAGAGAATGCAGCATGTGCTTTGCTTCGACTCTCTCAAATAGAAAAGAACAAGATCGCGATCGGAAGGTCAGGGGCCATTCCCCTTCTAGTGAACCTTCTGGAAAACGGCGGTATCCGCGGGAAGAAAGACGCATCGACGGCGCTGTATTCTCTTTGTTCAGTGAAGGAGAACAAGATCAGGGCGGTCCAAGCGGGAATCATGAAGCCGTTGGTGGAATTGATGGCTGATTCGGGATCAAACATGGTAGATAAGTCGGCGTATGTTTTAAGCGTGCTGGTATCGGTAGCGGAAGCGAGGACATCATTGGTGGAGGAAGGAGGTATTCCGGTGTTGGTGGAAATTATTGAGGTGGGGTCGCAGAAACAGAAGGAAATCGCCGTGGTTATCTTGTTACAAATTTGCGAGGACAACTTGAGCTATTGTAACATGGTGGCTCGCGAAGGAGCAATTCCTCCTTTGATTGCTCTGTCGCAGTCCGGCACGAATCGCGCCAGGCAAAAGGTGGAGACCCTCATAGAGCTTCTACGGCAACTAAGATCCGGCAACGCCGCTGCCCGTACGTCACAAGTGTCGGCATA 815 0.5006 MEIRLLAKNKPEYRLKIAKAGAIKPLISHMSSPDLQLQENAVTSILNLSLCDENKELIASSGAIKPLVRLLETGTSTAKENAACALLRLSQIEKNKIAIGRSGAIPLLVNLLENGGIRGKKDASTALYSLCSVKENKIRAVQAGIMKPLVELMADSGSNMVDKSAYVLSVLVSVAEARTSLVEEGGIPVLVEIIEVGSQKQKEIAVVILLQICEDNLSYCNMVAREGAIPPLIALSQSGTNRARQKVETLIELLRQLRSGNAAARTSQVSA 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02150 271 PANTHER U BOX DOMAIN-CONTAINING 1 264 - -
Bva06g02150 271 SUPERFAMILY ARM repeat 3 251 IPR016024 -
Bva06g02150 271 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 4-LIKE ISOFORM X1 1 264 - -
Bva06g02150 271 Pfam Armadillo/beta-catenin-like repeat 11 49 IPR000225 GO:0005515
Bva06g02150 271 Pfam Armadillo/beta-catenin-like repeat 52 90 IPR000225 GO:0005515
Bva06g02150 271 Pfam Armadillo/beta-catenin-like repeat 94 132 IPR000225 GO:0005515
Bva06g02150 271 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 21 63 IPR000225 GO:0005515
Bva06g02150 271 Gene3D - 1 117 IPR011989 -
Bva06g02150 271 Gene3D - 120 269 IPR011989 -
Bva06g02150 271 SMART arm_5 133 173 IPR000225 GO:0005515
Bva06g02150 271 SMART arm_5 51 91 IPR000225 GO:0005515
Bva06g02150 271 SMART arm_5 10 50 IPR000225 GO:0005515
Bva06g02150 271 SMART arm_5 174 214 IPR000225 GO:0005515
Bva06g02150 271 SMART arm_5 92 132 IPR000225 GO:0005515
Bva06g02150 271 SMART arm_5 215 259 IPR000225 GO:0005515
Bva06g02150 271 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 62 104 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02150 Bva-Chr6 14157877 14160253 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02150 2 263 U-box Gene Family AT2G23140 51.908 5.84e-83 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02150 - - pop:7472660 424.091