Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02146 ATGGAACCTATTGGAGCCTTCCCTGATGGAGAATGGGATTGCTTTGGTCGAATGTTTGCCACTGGAGAGCTTGATTGCTTACCACAATTTCTAGCTCATACTTCATTTCTGCTTGGGGAGGATGACGGATTGAACATCGGAAAAGAACCCACGTTTTGTTCTATCTCTGAAGCTGGGGAGAATGAGAGTATGTTATATTCTTTAGAAGCACTTAACTCCAGTTTGCAGTATAGTCATCAAGAAAATAGTTACAGAAGTGATTGCAGTACTGGTGATGTTTTCATAGCAAATCCAGGGCTTGCAAATTGCTACTTCAGTGATTCTGATCACGTTCCAGCAAATAATGCCTGTGTCTCGATGATCACCTCTTTTTTCCCTTCGCGTACTGACATTGCACTGGTAGAGACTCTCAGCCCGAATGAAAATGGCCGCACTGAGAGATTGGAGAATCCTGATTACAGGGAAGCAGAACCCACTGTCATTCCTGTCAAACAGTTGCGGCTGAAAAGGAGGCTTGATGTTCCAGAACAGGATTTTCCTggagaagataaaagaaaCGCCAACTCATCTGAAAATCAGAAGATAAAACCTCGCATATCAAGAGATGTGCAAAGATGCAAGAAAAATGCACGCCCAAAGAAGAACCAGAAGCTTACCCAAGATGGCAACGAGGAAGAAGAGATCAATGCAGGATCAGATGGACAGAGCTCTAGTAGTTACAGCTCGGAGGATGTTGATGCATCTCAGGAAAATAGTGGAGGCACGAGTTCAACTTCTAAATCGACTGTGGCTCTTAACTTAAATGGGAAGACAAGAGCCAGTAGGGGATCGGCAACAGATCCCCAAAGTCTTTATGCTAGGaaaagaagagaaagaataaatgaaCGACTAAGAATCCTCCAGAATCTTGTACCTAACGGAACAAAGGTTGATATAAGCACAATGCTTGAAGAGGCAGTACATTACGTTAAGTTTATGCAACTCCAAATTAAGCTCTTGAGCTCTGATGATCTTTGGATGTACGCTCCTATTGCTTACAATGGAATCGACATTCTACTCAATCGGAAGATATCCCCACCATTATG 1085 0.4184 MEPIGAFPDGEWDCFGRMFATGELDCLPQFLAHTSFLLGEDDGLNIGKEPTFCSISEAGENESMLYSLEALNSSLQYSHQENSYRSDCSTGDVFIANPGLANCYFSDSDHVPANNACVSMITSFFPSRTDIALVETLSPNENGRTERLENPDYREAEPTVIPVKQLRLKRRLDVPEQDFPGEDKRNANSSENQKIKPRISRDVQRCKKNARPKKNQKLTQDGNEEEEINAGSDGQSSSSYSSEDVDASQENSGGTSSTSKSTVALNLNGKTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFMQLQIKLLSSDDLWMYAPIAYNGIDILLNRKISPPL 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02146 361 CDD bHLH_AtIND_like 278 340 - -
Bva06g02146 361 Pfam Helix-loop-helix DNA-binding domain 287 327 IPR011598 GO:0046983
Bva06g02146 361 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 277 342 IPR036638 GO:0046983
Bva06g02146 361 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 3 359 - -
Bva06g02146 361 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 3 359 - -
Bva06g02146 361 MobiDBLite consensus disorder prediction 172 288 - -
Bva06g02146 361 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 277 326 IPR011598 GO:0046983
Bva06g02146 361 SMART finulus 283 332 IPR011598 GO:0046983
Bva06g02146 361 MobiDBLite consensus disorder prediction 229 281 - -
Bva06g02146 361 Gene3D - 279 335 IPR036638 GO:0046983
Bva06g02146 361 MobiDBLite consensus disorder prediction 172 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02146 Bva-Chr6 14139947 14141448 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02146 204 353 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 61.446 5.22e-58 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva06g02146 HLH 3.6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02146 - - qsu:112027126 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02146 06 14139947 14141448 Bva06g02146 06 14139947 14141448 ECH