Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02131 ATGGGAGAATGTCTTCAACTCTATGTCTCCGTTGTCAATACAATTGGGCTCGCTTCCTTGCTCCTCTTACTATTTGGATTTGTGGCATTTTCCACCAGTCTCCGATATGGCTATTACGGGGATCATCGTCTTGTTCTTGGACCCAGTTCATCGCGTTTGATGAAGGCAAGCTCTATTTTTGCGAAGCAGATCCAAGCGAAAAGTGACAATGTCAATCAAGCTTTACTCTTTGCCTTCAATGACAAGCCAGAGTTGAGCTCCAAAGCAAATTGGAGTTCCTCGGATTTCCTCGTTGTCGGAGCATACGGTCACTATGGATTTCCCTTGTGGTTAAACAAGGGCTCCACCATCCGTGTTAGATGGGAAGCACAGACCAACACGTTACATCAGCTACGAGGGGTTGTGATTAAAGGAGAAAGTAAGTTTAAAACGCTGCAGCCTAAACAAACAGTGTCTTCTGATGTAATTACTGCAGGTAAAGAAGCAGAATACATCGTCGAAGAGGATAATAAATACCACATTGGGGTTCTAAACAAGAATTCCAGGAACATAATAATGGCCCTGCATGTCAAAGTGTCTGCCATGGTATATGATACCACCAGAGCAAAGAGGATGTGCTCAACTGCAAAAGGATCCTGCGGGCTCAGTCTTCTCTTCCCTCAAACACATTACGTCGTTCTAGCGGCACCTAACAACGGAGATCTTGGCGGATGGTACGTTGAAGTTTCTTTTATGACTCGCTTCTTAACCTACATAATACTTTTAGGGTTTATTGTCATTGTTGTCTATCTGATACTAAAATGCCTTGGAAGCTTTGGTAGTGATGATCATATTCATAGTACCACTGGAACGTCGAATCATCATATTTATAGTAGCACAAGTAATGCAGTACCAGCACGAGAGGCAACTGAAACTGAACCTATGATGCAAGTTAATTCGAGTCGAATGAACTATGGAACAAATGAAGAAGATGACGATGAGGAGTCAGGATCACACAGTAGCTCCTCGGAAGATCTATatgatgaaaaattatgtGTCGTTTGTTACGATGAACAACGTAACTGCTTCTATGTTCCCTGTGGCCATTCTGCCACTTGCTATGACTGTGCGCAGAGGATTATAGAGGTGGAGAGCAAAGTCTGTCCCATATGCCGAAGGGTTATCAGCAAAACAAAGGGGTCTCTTACCCCAAGACGGGAGGAGGCGAGGTCCACCCTTTTCGATATCATTTCCGGCTGGCTGTTGCATTTCTCTGCGCAAAAACTGTGTAACAAAGAACGGAAACCCCGTAGCCGCGTAAAACTCACTATATCTATCTCTTCCTGTTCCTGTGGGGAATTTGAACAAAAGTGGGATCGATTTAAACACTGTTTCTTCAGCTTAACAATGAGTTCTCAGTCCCGAGAAGATGACTCTAAAGAAGACGACAAGGACGAAGAAGAGAACCGGCTACTGCAACCCCAATCTGATTCACAACTATTGTCGTTTTCGTTGTCTTCTTCTGACGATGAACAAGTCGCATATGAAGCAGGGGAGAAAATTCTGATAGTAGATTTAGACTCCTTGGATGATGTAGATTCAACGACGGTGCCGCCTTTCTCATGGAAGAAGCTATGGCTTTTCACGGGTCCTGGGTTTTTGATGAGCATAGCTTTTCTGGATCCGGGAAATCTCGAAGGGGATCTTCAGGCTGGAGCGATCGCCGGCTACTCGCTTCTCTGGCTATTGATGTGGGCCACAATTATGGGCTTGTTGATACAGCTTCTATCTGCGAGGGTTGGGGTGGCCACTGGGCGGCACCTGGCGGAGCTATGCAGGGAGGAATATCCCAATTGGGCAAGATTGGTGCTATGGTTCATGGCCGAGCTGGCCATGATTGGTGCTGATATTCAGGAGGTCATTGGGAGTGCCATCGCTATCCAGATTCTTAGCCATGGAGTGTTGCCTCTTTGGGCTGGAGTCTTAATTACTGCTTCGGATTGTttcatatttctatttcttgaGAACTATGGAGTGAGGAAGTTGGAAGCTGCTTTTGCGATTCTCATCGCAACTATGGCCCTTTCTTTTGCCTGGATGTTTGGTGACACTAAACCAAATGGAAAAGAACTTATGATGGGTATTTTGGTTCCGAGACTAAGCTCAAAAACAATTCGCCAAGCTGTGGGGGTTGTGGGTTGTGTCATAATGCCTCACAACGTTTTTCTACATTCTGCTTTGGTACAGTCAAGGAAGATTGATCCCCATAAGAAAGGCAGGGTACAGGAGGCTCTCAACTACTATTCCATTGAGTCGTCAGTTGCACTTTCAGTTTCCTTCATGATCAACCTATTTGTTACAACAGTTTTTGCCAAGGGGTTTTATGGTACAAAGCAGGCCAATAGCATTGGATTAGTAAATGCTGGGCAGTATCTTGAGGACAAGTATGGAGGAGGACTCTTCCCTATTCTTTATATATGGGGTATTGGGTTATTGGCTGCCGGACAGAGTAGCACTATCACTGGCACTTATGCTGGGCAGTTCATAATGGGGGGTTTTCTTAACCTTCGTTTAAAGAAATGGTTGAGGGCAGTGATTACTAGAAGTTTTGCAATTGTGCCAACGATAATTGTAGCTATTGTTTTTAATACATCAGAAGCTTCATTGGATGTTTTGAATGAATGGCTTAATGTCCTGCAATCTATTCAGATTCCTTTTGCTCTGATTCCCCTGCTCACCTTGGTTTCTAAAGAGAAGGTCATGGGGACCTTTAAGATTGGGCCCGTTCTTGAGAGGGTAGCATGGAGTATTGCTGCGCTAATAATAGTGATTAATGGGTATCTCTTGTtagatttcttcatttctgaAGTGAATGGCCTGCTGCTTGGTTTTGTAGTTTGCTCATGCACCGCTGCCTATGCGGCATTCGTTGCATATTTGGTCACACAGAGCGGTATTCTTCCTTCCACTTGGGTTAGTCAACTTCCCAAGGGATTTTCCTGTAGTGAGAATTA 2993 0.4394 MSSTLCLRCQYNWARFLAPLTIWICVSTSLRYGYYGDHRLVLGPSSSRLMKASSIFAKQIQAKSDNVNQALLFAFNDKPELSSKANWSSSDFLVVGAYGHYGFPLWLNKGSTIRVRWEAQTNTLHQLRGVVIKGESKFKTLQPKQTVSSDVITAGKEAEYIVEEDNKYHIGVLNKNSRNIIMALHVKVSAMVYDTTRAKRMCSTAKGSCGLSLLFPQTHYVVLAAPNNGDLGGWYVEVSFMTRFLTYIILLGFIVIVVYLILKCLGSFGSDDHIHSTTGTSNHHIYSSTSNAVPAREATETEPMMQVNSSRMNYGTNEEDDDEESGSHSSSSEDLYDEKLCVVCYDEQRNCFYVPCGHSATCYDCAQRIIEVESKVCPICRRVISKTKGSLTPRREEARSTLFDIISGWLLHFSAQKLCNKERKPRSRVKLTISISSCSCGEFEQKWDRFKHCFFSLTMSSQSREDDSKEDDKDEEENRLLQPQSDSQLLSFSLSSSDDEQVAYEAGEKILIVDLDSLDDVDSTTVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATIMGLLIQLLSARVGVATGRHLAELCREEYPNWARLVLWFMAELAMIGADIQEVIGSAIAIQILSHGVLPLWAGVLITASDCFIFLFLENYGVRKLEAAFAILIATMALSFAWMFGDTKPNGKELMMGILVPRLSSKTIRQAVGVVGCVIMPHNVFLHSALVQSRKIDPHKKGRVQEALNYYSIESSVALSVSFMINLFVTTVFAKGFYGTKQANSIGLVNAGQYLEDKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWLRAVITRSFAIVPTIIVAIVFNTSEASLDVLNEWLNVLQSIQIPFALIPLLTLVSKEKVMGTFKIGPVLERVAWSIAALIIVINGYLLLDFFISEVNGLLLGFVVCSCTAAYAAFVAYLVTQSGILPSTWVSQLPKGFSCSEN 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02131 993 Pfam Natural resistance-associated macrophage protein 555 916 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva06g02131 993 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 316 389 IPR013083 -
Bva06g02131 993 MobiDBLite consensus disorder prediction 464 481 - -
Bva06g02131 993 Pfam Domain of unknown function (DUF4792) 73 138 IPR032008 -
Bva06g02131 993 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 493 983 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva06g02131 993 Hamap Divalent metal cation transporter MntH [mntH]. 520 942 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva06g02131 993 Pfam Domain of unknown function (DUF4793) 158 260 IPR032010 -
Bva06g02131 993 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 532 910 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva06g02131 993 MobiDBLite consensus disorder prediction 285 332 - -
Bva06g02131 993 PRINTS Natural resistance-associated macrophage protein signature 824 843 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva06g02131 993 PRINTS Natural resistance-associated macrophage protein signature 886 905 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva06g02131 993 PRINTS Natural resistance-associated macrophage protein signature 613 639 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva06g02131 993 PRINTS Natural resistance-associated macrophage protein signature 852 869 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva06g02131 993 PRINTS Natural resistance-associated macrophage protein signature 643 662 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva06g02131 993 PRINTS Natural resistance-associated macrophage protein signature 668 689 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva06g02131 993 PRINTS Natural resistance-associated macrophage protein signature 717 740 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva06g02131 993 PANTHER BNAC08G04640D PROTEIN 493 983 - -
Bva06g02131 993 SMART ring_2 341 380 IPR001841 -
Bva06g02131 993 SUPERFAMILY RING/U-box 331 388 - -
Bva06g02131 993 ProSiteProfiles Zinc finger RING-type profile. 341 381 IPR001841 -
Bva06g02131 993 MobiDBLite consensus disorder prediction 285 314 - -
Bva06g02131 993 Pfam Zinc finger, C3HC4 type (RING finger) 338 386 - -
Bva06g02131 993 MobiDBLite consensus disorder prediction 464 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02131 Bva-Chr6 14070800 14077836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02131 465 973 Inorganic Solute Cotransporters AT1G47240 80.980 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02131 K21398 - mnt:21393551 868.226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02131 06 14070800 14077836 Bva06g02131 06 14070800 14077836 ECH