Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02129 ATGGAAAACAAAGAGAACTCTGCCCCTCGTCGTCTTACTCGTGCAGCCAAGAAGAGGGCCGCAGCTGCAATCACCGATCTCCTCCATGCCCCCGCCAAGAAGCGCGTGGTGTTAGGGGAGCTTCCCAACTTGACAAATGTTCTTGTTACCAATAAACCAGGCTCTGGGGCAGAGACCCAAGAGGAGAAAGGTGGAATGAAGAGAAAGGTCAGAAAAGTTCTACCCACTACAATAGCCACGATACCGGCCAAGTCAGATGACGTCGATGCTAATTTGGATGATCCTCAAATGTGCCAGACTTATGTTTCCGACATTTATGAATATCTCCGAACAATGGAGGCTGATCCAAAGAGAAGACCATTACCTGATTACTTGCAGAGGGTTCAGAAGGATGTTAATGCTAGTATGAGGGGTATTCTGGTGGATTGGTTGGTGGAGGTGGCTGAGGAATACAAGCTTGTTTCAGATACTCTTTATCTGtctatttctttcattgatagaTATTTATCTTTGAAAGCTCTAAATAAGCAGAAATTGCAGTTACTGGGCGTTTCTTCGATGCTAATTGCTTCAAAATACGAAGAAATCAAGCCTCCCGAAGTGGAAGAATTTTGTTACATTACTGACAACACATACACTAAGGAAGAGGTTCTAAATATGGAAGCCGATATACTAGAAATCTTGAAGTTTGAATTGGGGAACCCTACAGTAAAGACATTTCTAAGAAGATTCTCCAGAACGGCTCAAGAGAATTATGAGTCTTCTGCCCTGCAGTTTGAGTTCCTTAGCTACTACCTTGCGGAGCTCAGTTTGTTGGATTATAATTGCGTGAAGTTTTTGCCTTCTTTGGTAGCCGCATCAGTTATTTTTCTAGCCAGATTTATGTTAAGACCAAAGATTCATCCTTGGGATTCAACCCTCCGTCAGCACTCTGGCTATGAACCAGCGAACTTAAAGGAGTGTGTCCTACTCATACATGATTTGTATCTCAGTAGGAGAGGGCGGTCTCTGCAAgctttaagagaaaaatacaagCAGCATAAGTTCAAATGTGTTGCGACAACGCCTTCTCCTCCAGAGATTCCGCTTTCTTACTTTGAAGATAGCGTGACAGATCTTTA 1121 0.4219 MENKENSAPRRLTRAAKKRAAAAITDLLHAPAKKRVVLGELPNLTNVLVTNKPGSGAETQEEKGGMKRKVRKVLPTTIATIPAKSDDVDANLDDPQMCQTYVSDIYEYLRTMEADPKRRPLPDYLQRVQKDVNASMRGILVDWLVEVAEEYKLVSDTLYLSISFIDRYLSLKALNKQKLQLLGVSSMLIASKYEEIKPPEVEEFCYITDNTYTKEEVLNMEADILEILKFELGNPTVKTFLRRFSRTAQENYESSALQFEFLSYYLAELSLLDYNCVKFLPSLVAASVIFLARFMLRPKIHPWDSTLRQHSGYEPANLKECVLLIHDLYLSRRGRSLQALREKYKQHKFKCVATTPSPPEIPLSYFEDSVTDL 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02129 373 PANTHER CYCLIN-A3-1-RELATED 25 369 - -
Bva06g02129 373 SMART Cyclin_C_2 235 358 IPR004367 -
Bva06g02129 373 SUPERFAMILY Cyclin-like 93 232 IPR036915 -
Bva06g02129 373 CDD CYCLIN 136 225 IPR013763 -
Bva06g02129 373 SUPERFAMILY Cyclin-like 235 360 IPR036915 -
Bva06g02129 373 Pfam Cyclin, N-terminal domain 104 232 IPR006671 -
Bva06g02129 373 Gene3D - 120 233 - -
Bva06g02129 373 CDD CYCLIN 235 326 IPR013763 -
Bva06g02129 373 ProSitePatterns Cyclins signature. 137 168 IPR006671 -
Bva06g02129 373 Pfam Cyclin, C-terminal domain 235 357 IPR004367 -
Bva06g02129 373 SMART cyclin_7 142 226 IPR013763 -
Bva06g02129 373 SMART cyclin_7 239 327 IPR013763 -
Bva06g02129 373 Gene3D - 104 354 - -
Bva06g02129 373 PANTHER CYCLINS 25 369 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02129 Bva-Chr6 14062038 14065198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02129 5 368 Core Cell Cycle Gene Families AT1G47230 59.511 1.30e-160 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02129 K06627 - pvy:116125667 505.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02129 06 14062038 14065198 Bva06g02129 06 14062038 14065198 ECH