Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02108 ATGGAAGAAAGAGATTGTTGTTCGATGGCAACaaacagaagcagaagcagaagcagccCAGAGAAGAGAAAGCAGCACCAAGCACAAACTGCAGCAgcaagaggaagagagaataAAGGCAAAGAGAAACCGTACAGAGGAATAAGGATGAGGAAGTGGGGAAAGTGGGTGGCCGAGATTCGGGAACCAAACAAAAGGTCTAGGATTTGGCTTGGTTCTTACACCACACCTGTCGCCGCGGCACGCGCTTACGACACGGCCGTTTTTTATCTGAGAGGACCTTCCGCTCGCCTTAACTTCCCCGAGTTGTTATTCCAAGAAGACGACCATTTCATCCAAGGCGGAGGCGCCCACATGTCTGCCGATTCCATACGCAAGAAAGCCACCGAAGTTGGCGCCAGAGTTGATGCTCTCCAAACCTCTACTTCTCAATCCAATTCCCAGAAACCTGACTTGAATGAGTGTCCCAACCCCGAAGACTG 482 0.4627 MEERDCCSMATNRSRSRSSPEKRKQHQAQTAAARGRENKGKEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPELLFQEDDHFIQGGGAHMSADSIRKKATEVGARVDALQTSTSQSNSQKPDLNECPNPED 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02108 160 ProSiteProfiles AP2/ERF domain profile. 44 101 IPR001471 GO:0003700|GO:0006355
Bva06g02108 160 MobiDBLite consensus disorder prediction 137 160 - -
Bva06g02108 160 SMART rav1_2 44 107 IPR001471 GO:0003700|GO:0006355
Bva06g02108 160 PRINTS Ethylene responsive element binding protein signature 45 56 IPR001471 GO:0003700|GO:0006355
Bva06g02108 160 PRINTS Ethylene responsive element binding protein signature 83 103 IPR001471 GO:0003700|GO:0006355
Bva06g02108 160 Gene3D AP2/ERF domain 44 102 IPR036955 GO:0003700|GO:0006355
Bva06g02108 160 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 10 160 - -
Bva06g02108 160 SUPERFAMILY DNA-binding domain 44 102 IPR016177 GO:0003677
Bva06g02108 160 MobiDBLite consensus disorder prediction 1 44 - -
Bva06g02108 160 Pfam AP2 domain 45 93 IPR001471 GO:0003700|GO:0006355
Bva06g02108 160 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 10 160 - -
Bva06g02108 160 MobiDBLite consensus disorder prediction 137 153 - -
Bva06g02108 160 CDD AP2 45 103 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02108 Bva-Chr6 13959105 13960021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02108 43 148 AP2-EREBP Transcription Factor Family AT1G46768 73.585 1.44e-53 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva06g02108 AP2 2.5e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02108 K09286 - gmx:732579 202.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02108 06 13959105 13960021 Bva06g02108 06 13959105 13960021 ECH