Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02107 ATGGGAACTCGAAGCATGAAGGTGCATCGGCTGGCACGTGGATTCTGGGAGCATGAACCCTCTCTCTCCCTTGGCTGCAAGCGCTTACGCCCTCTTGCTCCCAAGCTTCCAAACACCGAAACTCCTGTTGCTGTTCCGGCTTTCGATCTCAAGAGCTTCATCAGACCCGAAAGTGGCCCCATAAAACTGGGATCCccacatgaaaataagaaaaatccaacACCCCACTCCCACCACCACCAGCAGCAGCAGGTGGAAACGCATCCGGGTGGGACACGGTGGAATCCGACGCAAGAACAGATAGGCTTATTGGAGATGTTGTACAGAGGTGGCATGAGAACACCAAATGCTCAACAGATAGAGCAGATCACAGCTCAACTTGGCAAGTACGGCAAAATCGAAGGGAAGAATGTTTTCTATTGGTTCCAAAATCACAAAGCACGCGAGAGACAAAAGCAGAAGCGCAATAGCCTTGGTCTAATTAGTCATAGTCCACGAACTCCGCCACCCATTACTACCATAAGTTTGGAGCCAATAAGGAGGGAAGTCGAGGAAGATAGTCCATATAAGAAGAAATGTAGGAGCTGGGGATTTGAGGAGCAAAGCAGGTCACCGTGTCATAAAGAGGAGGAACATCAACACAGAACTCTGGAGCTTTTCCCATTGCACCCAGAAGGCAGATG 683 0.4846 MGTRSMKVHRLARGFWEHEPSLSLGCKRLRPLAPKLPNTETPVAVPAFDLKSFIRPESGPIKLGSPHENKKNPTPHSHHHQQQQVETHPGGTRWNPTQEQIGLLEMLYRGGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLISHSPRTPPPITTISLEPIRREVEEDSPYKKKCRSWGFEEQSRSPCHKEEEHQHRTLELFPLHPEGR 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02107 227 CDD homeodomain 92 153 IPR001356 GO:0003677
Bva06g02107 227 MobiDBLite consensus disorder prediction 178 227 - -
Bva06g02107 227 ProSiteProfiles 'Homeobox' domain profile. 87 152 IPR001356 GO:0003677
Bva06g02107 227 SMART HOX_1 89 156 IPR001356 GO:0003677
Bva06g02107 227 Gene3D - 74 159 - -
Bva06g02107 227 PANTHER WUSCHEL-RELATED HOMEOBOX 4 6 227 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Bva06g02107 227 SUPERFAMILY Homeodomain-like 88 157 IPR009057 -
Bva06g02107 227 MobiDBLite consensus disorder prediction 56 96 - -
Bva06g02107 227 MobiDBLite consensus disorder prediction 78 96 - -
Bva06g02107 227 MobiDBLite consensus disorder prediction 150 227 - -
Bva06g02107 227 Pfam Homeodomain 92 151 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02107 Bva-Chr6 13951632 13952717 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02107 6 162 Wox Gene Family AT1G46480 63.743 3.99e-65 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Bva06g02107 Homeodomain 1.7e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02107 - - qsu:111988759 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02107 06 13951632 13952717 Bva06g02107 06 13951632 13952717 ECH