Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02102 ATGTTCATGGCTAATATGCATGAAACCCATCCCTCTGTAATCCCAGGCCTGGCTTCTCCTGATCCCGAAGAGGTATCTACCTTGTTGAACCAACTCATCCACCACAATTCATCCTCTTCTAGCATGTCTTCAAAGACCAAGACCTTACCTCCACCGTGGCTTTCTCCACCAGTGGGCGTGGGGACCATGGGGTTTCTCCGTCCCGACCCCGAGGACCCATTTGAGGATCCTCACAGGTTTGCCCAATTGGGGTTGGGGACTGAATCCGGGCCACACTATCCCCTTAGACTTGTAAATTCTCTTGCTGCCGATTCCTCCACTAGTTTCAATTTCTCTGATCCCTATGATTGCCTTCGCATTCCGACTGAGGCTCATGTCAAAAGGGCTTCAGCAAACCAGCTTTTCTCCACCGATGTTGAGGATTCTGATGCAAACACCTCCTTGAAACAAAATAGGACTTCGTCGGACGGTGATCTTGTTTCCCCTCTCGAGAAGAATACCGAGGTCTCAGAGTTGCCATCAAAGCCAGTCCCACCACCTACTTCATCAAAGAGAAGCAGGGCTGCAGAGGTCCATAATTTGTCGGAAAAGAAAAGGAGAAGTAGGAtcaatgagaaaatgaaagccTTACAGAATTTGATTCCAAATTCTAACAAGACGGACAAAGCTTCAATGCTAGATGAGGCGATTGAATATTTGAAGCAGCTTCAGCTTCAAGTACAAATGTTAATGATGAGAAATGGTTTGAGCTTGCACCCAATGTGTTTACCAGGATCTCTGCAGCCAATTATATTGCCTCATggtgaattgaattttgacgAGGGCCATGGGTTTCAGAATCCCAGCAGTGGAATTGCGTCATCAGTGAACGCTGAAGGCTTGGTGCAAACTGCTTTTAGTCTTCCAAAACATTCCACAGTCTCAAATCAGTCTGTTTTCCAACCATCTGTGGATGCTCATTTCGGACATTCAAAATCATCCGAGGACAAACTTGGTGACGGCTA 1004 0.4512 MFMANMHETHPSVIPGLASPDPEEVSTLLNQLIHHNSSSSSMSSKTKTLPPPWLSPPVGVGTMGFLRPDPEDPFEDPHRFAQLGLGTESGPHYPLRLVNSLAADSSTSFNFSDPYDCLRIPTEAHVKRASANQLFSTDVEDSDANTSLKQNRTSSDGDLVSPLEKNTEVSELPSKPVPPPTSSKRSRAAEVHNLSEKKRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLMMRNGLSLHPMCLPGSLQPIILPHGELNFDEGHGFQNPSSGIASSVNAEGLVQTAFSLPKHSTVSNQSVFQPSVDAHFGHSKSSEDKLGDG 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02102 334 CDD bHLH_AtPIF_like 187 249 - -
Bva06g02102 334 Pfam Helix-loop-helix DNA-binding domain 191 237 IPR011598 GO:0046983
Bva06g02102 334 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 187 236 IPR011598 GO:0046983
Bva06g02102 334 PANTHER TRANSCRIPTION FACTOR SPATULA 51 321 - -
Bva06g02102 334 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 184 247 IPR036638 GO:0046983
Bva06g02102 334 MobiDBLite consensus disorder prediction 137 161 - -
Bva06g02102 334 MobiDBLite consensus disorder prediction 137 202 - -
Bva06g02102 334 Gene3D - 182 246 IPR036638 GO:0046983
Bva06g02102 334 SMART finulus 193 242 IPR011598 GO:0046983
Bva06g02102 334 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 51 321 IPR031066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02102 Bva-Chr6 13928541 13931245 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02102 187 322 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 59.124 1.90e-42 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva06g02102 HLH 5.8e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02102 - - gmx:100785332 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02102 06 13928541 13931245 Bva06g02102 06 13928541 13931245 ECH