Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02098 ATGCAGCAGCTCCCCGAGTTGTGTGCTACTTACGGTGACGTCGTTGCCGACTTGCCAACGCAGCAATTCTCTCTTGCGAGTAGAGGCGGCGGTAACAGCAGCATAAACGGCGTTAATGCTTTGTCGCACTTTATTGATATGGCTTCTTCGTCTTCATTAACAAACGCACTAGCATCTCCATCTCGTACAATTTTATCCTTCGCTAACCCTACGCCTACCACATCGCCATTGCCGTTCAATCCATCACCCTCGGAGAAACGGAATTCGATGGCGGCGACGAGGGAGATGATATTCAGGATAGCGGCCATGCAGCCGATACACATAGACCCTGAGTCGGTGAAGCCACCTAAGCGGAGAAACGTGAAGATCTCAAAGGATCCGCAGAGCGTGGCTGCTCGGCATCGTAGAGAAAGGATAAGCGAGAGAATAAGGATACTGCAGAGGCTGGTCCCTGGAGGGACTAAGATGGATACGGCCTCTATGTTAGACGAAGCTATTCACTatgttaaattcttaaaaactcAGCTTCAATGGCTGGAACGTGCTGCTAATACAACCACGCCCGCCGAGATATGTTTCCCTCTCCCAATCTCTTGTACAACTAGTACCACTTATCTTCCTATGCCAAAACCTCAAAACCTTCAGATGCTTAATTA 656 0.4817 MQQLPELCATYGDVVADLPTQQFSLASRGGGNSSINGVNALSHFIDMASSSSLTNALASPSRTILSFANPTPTTSPLPFNPSPSEKRNSMAATREMIFRIAAMQPIHIDPESVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQLQWLERAANTTTPAEICFPLPISCTTSTTYLPMPKPQNLQMLN 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02098 218 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 4 210 IPR045843 GO:0003700|GO:0006355
Bva06g02098 218 CDD bHLH_AtIND_like 124 180 - -
Bva06g02098 218 PANTHER BASIC HELIX-LOOP-HELIX (BHLH)-LIKE PROTEIN 4 210 - -
Bva06g02098 218 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 127 182 IPR036638 GO:0046983
Bva06g02098 218 Gene3D - 122 189 IPR036638 GO:0046983
Bva06g02098 218 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 123 172 IPR011598 GO:0046983
Bva06g02098 218 SMART finulus 129 178 IPR011598 GO:0046983
Bva06g02098 218 Pfam Helix-loop-helix DNA-binding domain 133 172 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02098 Bva-Chr6 13904622 13905278 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02098 45 183 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 66.447 5.49e-49 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva06g02098 HLH 1.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02098 - - zju:107419982 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02098 06 13904622 13905278 Bva06g02098 06 13904622 13905278 ECH