Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02090 ATGTTGCAGAATTTGGAGCGCCGGGAAACTGAATATATGAGGCTGCAGAGACGTGAAGTTGGAATTGATGACTTTGAGCAATTAACAGTAATCGTTAAAGGCGCTTTTGGTGATGTGGAACATGTTCGATCTGAGAGGAACTTGCTGGAAGAGGTGGATAATCGATGCATAGTGAAACTTGAATACTCATTCCAACATTCAGATTTCCTATATCTTATCATGGAGTATTTACCGGGTGGTGACATTATGACCTTCTTAATGAGAGAAGGTATTCTTTCTGAAGATGTTGCCCCCTTCTATGTTGCTGAAAGCATCCTAGCTATACATTCAATACATCAACACAACTATGTTCATAGGGATATAAAACCAGATAATCTGATACTGGATAGAAATGGCCATTTGAAGCTTTCAGACTTCGGCTTATGCAAGCCTCTTGATGATAAATATTCAACAATTTTGTTGGAAAGTGAAGATTTTAATAGTCATGAATCAACTAGTGAAGCTGAAGGATATTCGGCCTCCCCTTGGTTGATTCCGAAAGAACAATTACAACAGTGGAAACACAATCGTAAGGCATTGGCATATTCAACTGTTGGAACTCTTGACTACATGGCACCTGAAGTTTTGCTAAAAAAAGGTTATGGAATGGAATGTGATTGGTGGTCTCTTGGAGCAATCATGTATGAGATGCTTGTTGGGTGTCCTccgtttggttccaatgatcCAAGGATGGCTTGTCGTAAGATAATCAACTGGAAAATTTGCCTGAAATTTCCTGAAGAAATAAAGATATCAGATGAAGCCAAGGATCTGATCTGTCACTTACTATGTGACGTTGAAACAAGGCTGGGGACCAGAGgagttgaagaaataaagGCACATCCATGGTTTAGAGGTATTCAGTGGGATATGCTTTATGAAATGGAAGCTGCATATAAACTATTGTCACAGGAGACTTGGACACACAACTTTGAGAAGGTTCCTGAAGTTAAAGGTCTACCATCTACAACAGCTACCGTGGGACCTTGGCGAAAGATGTTGACATCCAAAGACACCAATTTCATCGGATATACTTTTAGGAAATCCGACATCCTTAAATCACTTGAAAGTTCTGGTACAGATTTCAGATCAAATGGATCGTCAAAAACCCCTTCTCTAGTTTCCTTGCTAGGACGGATTGACTTGCAAGAAACTGCCATTCCAGAAAGTGAACAGAAGCAGGAAACTTG 1229 0.3889 MLQNLERRETEYMRLQRREVGIDDFEQLTVIVKGAFGDVEHVRSERNLLEEVDNRCIVKLEYSFQHSDFLYLIMEYLPGGDIMTFLMREGILSEDVAPFYVAESILAIHSIHQHNYVHRDIKPDNLILDRNGHLKLSDFGLCKPLDDKYSTILLESEDFNSHESTSEAEGYSASPWLIPKEQLQQWKHNRKALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLVGCPPFGSNDPRMACRKIINWKICLKFPEEIKISDEAKDLICHLLCDVETRLGTRGVEEIKAHPWFRGIQWDMLYEMEAAYKLLSQETWTHNFEKVPEVKGLPSTTATVGPWRKMLTSKDTNFIGYTFRKSDILKSLESSGTDFRSNGSSKTPSLVSLLGRIDLQETAIPESEQKQET 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02090 409 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 39 - -
Bva06g02090 409 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 38 395 - -
Bva06g02090 409 ProSitePatterns Serine/Threonine protein kinases active-site signature. 116 128 IPR008271 GO:0004672|GO:0006468
Bva06g02090 409 Gene3D Phosphorylase Kinase; domain 1 315 325 - -
Bva06g02090 409 Gene3D Phosphorylase Kinase; domain 1 38 80 - -
Bva06g02090 409 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 39 - -
Bva06g02090 409 ProSiteProfiles AGC-kinase C-terminal domain profile. 298 369 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bva06g02090 409 ProSiteProfiles Protein kinase domain profile. 1 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02090 409 Pfam Protein kinase domain 40 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02090 409 Gene3D Transferase(Phosphotransferase) domain 1 196 314 - -
Bva06g02090 409 Gene3D Transferase(Phosphotransferase) domain 1 81 172 - -
Bva06g02090 409 SMART serkin_6 25 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02090 409 SUPERFAMILY Protein kinase-like (PK-like) 10 342 IPR011009 -
Bva06g02090 409 PANTHER SERINE/THREONINE-PROTEIN KINASE 38 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02090 Bva-Chr6 13861856 13867372 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02090 1 397 AGC Kinase Gene Family AT5G09890 70.862 0.0 623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Bva06g02090 Pkinase 3.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02090 K08790 - gmx:100814085 683.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02090 06 13861856 13867372 Bva06g02090 06 13861856 13867372 ECH